RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
PDLIM5-212ENST00000509333 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
PDLIM5-212ENST00000509333 MOXD2PA6NHM9 499 aa18.68■□□□□ 0.58
PDLIM5-212ENST00000509333 APOA5Q6Q788 366 aa18.68■□□□□ 0.58
PDLIM5-212ENST00000509333 CCDC82Q8N4S0 544 aa18.68■□□□□ 0.58
PDLIM5-212ENST00000509333 AP5M1Q9H0R1 490 aa18.68■□□□□ 0.58
PDLIM5-212ENST00000509333 GCOM1H8Y6P7 765 aaPredicted RBP18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 ASGR1P07306 291 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 NR3C2P08235 984 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 POLR2MP0CAP2 368 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 SYN1P17600 705 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 HOXA13P31271 388 aaPredicted RBP18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 BEX3Q00994 111 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 TLE2Q04725 743 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 FUT2Q10981 343 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 HABP4Q5JVS0 413 aaKnown RBP18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 ARHGEF16Q5VV41 709 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 CCDC62Q6P9F0 684 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 CHRDL2Q6WN34 429 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 Q6ZUG5 572 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 TMTC3Q6ZXV5 915 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 GDF15Q99988 308 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 PXMP2Q9NR77 195 aa18.67■□□□□ 0.58
PDLIM5-212ENST00000509333 ZBTB43O43298 467 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 EIF3JO75822 258 aaKnown RBP18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 PSMA5P28066 241 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 CDK7P50613 346 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 STXBP2Q15833 593 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 FSCN1Q16658 493 aaKnown RBP18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 TRIM60Q495X7 471 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 BLOC1S2Q6QNY1 142 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 TLK2Q86UE8 772 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 VSIG10LQ86VR7 867 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 MICU3Q86XE3 530 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 SCFD2Q8WU76 684 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 AGXT2Q9BYV1 514 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 ZSWIM6Q9HCJ5 1215 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 RBM27Q9P2N5 1060 aaKnown RBP18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 ATP11BQ9Y2G3 1177 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 ELP1O95163 1332 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 MYH6P13533 1939 aa18.66■□□□□ 0.58
PDLIM5-212ENST00000509333 EIF2AK2P19525 551 aaKnown RBP18.65■□□□□ 0.58
PDLIM5-212ENST00000509333 RPS6KB1P23443 525 aa18.65■□□□□ 0.58
PDLIM5-212ENST00000509333 TOX2Q96NM4 488 aa18.65■□□□□ 0.58
PDLIM5-212ENST00000509333 PDCD2LQ9BRP1 358 aa18.65■□□□□ 0.58
PDLIM5-212ENST00000509333 TRIOBPQ9H2D6 2365 aa18.64■□□□□ 0.58
PDLIM5-212ENST00000509333 KLF18A0A0U1RQI7 1052 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 hCG_1642624A0A1W2PR95 340 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 ARIH2O95376 493 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 TXNP10599 105 aaKnown RBP18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 CDC27P30260 824 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 BMP8BP34820 402 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 ADD1P35611 737 aaKnown RBP18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 APOBRQ0VD83 1088 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 SEPT14Q6ZU15 432 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 FCHSD1Q86WN1 690 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 COPS5Q92905 334 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 VTI1AQ96AJ9 217 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 GLT1D1Q96MS3 346 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 STARD7Q9NQZ5 370 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 RBM28Q9NW13 759 aaKnown RBP18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 PCDH10Q9P2E7 1040 aa18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 SEC63Q9UGP8 760 aaKnown RBP18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 DDX41Q9UJV9 622 aaKnown RBP18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 V9GY48 417 aaPredicted RBP18.64■□□□□ 0.57
PDLIM5-212ENST00000509333 MEIS2O14770 477 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 NKRFO15226 690 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 RCAN1P53805 252 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 EVCP57679 992 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 FGD1P98174 961 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 TTLL4Q14679 1199 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 PPP2R5BQ15173 497 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 RTN1Q16799 776 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 USP17L6PQ6QN14 398 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 CXCL17Q6UXB2 119 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 RUFY3Q7L099 469 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 ANKRD33Q7Z3H0 272 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 SH3RF1Q7Z6J0 888 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 BRF1Q92994 677 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 TM6SF1Q9BZW5 370 aa18.63■□□□□ 0.57
PDLIM5-212ENST00000509333 A6NJR5 290 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 ARVCFO00192 962 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 PIK3CDO00329 1044 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 ZEB2O60315 1214 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 CABYRO75952 493 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 RGS20O76081 388 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 CASTP20810 708 aaKnown RBP18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 MAGEA10P43363 369 aaPredicted RBP18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 PGM5Q15124 567 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 SLC43A3Q8NBI5 491 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 PSTPIP2Q9H939 334 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 GRIN2DO15399 1336 aa18.62■□□□□ 0.57
PDLIM5-212ENST00000509333 TRIM43BA6NCK2 446 aa18.61■□□□□ 0.57
PDLIM5-212ENST00000509333 MYCLP12524 364 aaPredicted RBP18.61■□□□□ 0.57
PDLIM5-212ENST00000509333 FAAP100Q0VG06 881 aa18.61■□□□□ 0.57
PDLIM5-212ENST00000509333 LY6KQ17RY6 165 aa18.61■□□□□ 0.57
PDLIM5-212ENST00000509333 OR6J1Q8NGC5 347 aa18.61■□□□□ 0.57
PDLIM5-212ENST00000509333 IL31RAQ8NI17 732 aa18.61■□□□□ 0.57
PDLIM5-212ENST00000509333 TRIM43Q96BQ3 446 aaPredicted RBP18.61■□□□□ 0.57
PDLIM5-212ENST00000509333 RANBP2P49792 3224 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms