RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 KIF28PB7ZC32 967 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 GPR37L1O60883 481 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 GNAT2P19087 354 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 PTGISQ16647 500 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 GDF6Q6KF10 455 aaPredicted RBP12.07□□□□□ -0.48
COPS4-207ENST00000509317 PHOSPHO2Q8TCD6 241 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 OTUD7AQ8TE49 926 aaPredicted RBP12.07□□□□□ -0.48
COPS4-207ENST00000509317 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
COPS4-207ENST00000509317 UIMC1Q96RL1 719 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 ZBED2Q9BTP6 218 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 NAPBQ9H115 298 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 RANBP17Q9H2T7 1088 aaKnown RBP12.07□□□□□ -0.48
COPS4-207ENST00000509317 SUGCTQ9HAC7 445 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 NOD1Q9Y239 953 aa12.07□□□□□ -0.48
COPS4-207ENST00000509317 PI4K2BG5E9Z4 385 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 PITPNM1O00562 1244 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 RANBP6O60518 1105 aaKnown RBP12.06□□□□□ -0.48
COPS4-207ENST00000509317 PLA2G6O60733 806 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 IL9P15248 144 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 KCNA5P22460 613 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 RFC2P35250 354 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 KCNJ6P48051 423 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 PDE4DQ08499 809 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 NFRKBQ6P4R8 1299 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 ANKS1AQ92625 1134 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 NACAP1Q9BZK3 213 aa12.06□□□□□ -0.48
COPS4-207ENST00000509317 UBE2ZQ9H832 354 aaPredicted RBP12.06□□□□□ -0.48
COPS4-207ENST00000509317 ADD3Q9UEY8 706 aaKnown RBP12.06□□□□□ -0.48
COPS4-207ENST00000509317 PTPRSQ13332 1948 aa12.05□□□□□ -0.48
COPS4-207ENST00000509317 A6NJR5 290 aa12.05□□□□□ -0.48
COPS4-207ENST00000509317 NBNO60934 754 aa12.05□□□□□ -0.48
COPS4-207ENST00000509317 ZFYP08048 801 aaPredicted RBP12.05□□□□□ -0.48
COPS4-207ENST00000509317 TXNP10599 105 aaKnown RBP12.05□□□□□ -0.48
COPS4-207ENST00000509317 RPS6P62753 249 aaKnown RBP12.05□□□□□ -0.48
COPS4-207ENST00000509317 BFSP2Q13515 415 aa12.05□□□□□ -0.48
COPS4-207ENST00000509317 CHST3Q7LGC8 479 aa12.05□□□□□ -0.48
COPS4-207ENST00000509317 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.05□□□□□ -0.48
COPS4-207ENST00000509317 AFG1LQ8WV93 481 aa12.05□□□□□ -0.48
COPS4-207ENST00000509317 WNT8BQ93098 351 aa12.05□□□□□ -0.48
COPS4-207ENST00000509317 CPVLQ9H3G5 476 aa12.05□□□□□ -0.48
COPS4-207ENST00000509317 ARIH1Q9Y4X5 557 aaPredicted RBP12.05□□□□□ -0.48
COPS4-207ENST00000509317 LINC01553A4QN01 128 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 BAIAP3O94812 1187 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 SLC3A2P08195 630 aaKnown RBP12.04□□□□□ -0.48
COPS4-207ENST00000509317 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
COPS4-207ENST00000509317 LY6KQ17RY6 165 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 RRP12Q5JTH9 1297 aaKnown RBP12.04□□□□□ -0.48
COPS4-207ENST00000509317 ZMYM1Q5SVZ6 1142 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 RNF207Q6ZRF8 634 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 LRRC8DQ7L1W4 858 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 FAM178BQ8IXR5 827 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 GJD3Q8N144 294 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 SCFD2Q8WU76 684 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 KAT2BQ92831 832 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 C17orf80Q9BSJ5 609 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 FSD1Q9BTV5 496 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 SCN10AQ9Y5Y9 1956 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 TANC1Q9C0D5 1861 aa12.04□□□□□ -0.48
COPS4-207ENST00000509317 H3BQ06 376 aaPredicted RBP12.03□□□□□ -0.48
COPS4-207ENST00000509317 SORBS3O60504 671 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 SELPP16109 830 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 EDNRBP24530 442 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 ZNF200P98182 395 aaPredicted RBP12.03□□□□□ -0.48
COPS4-207ENST00000509317 MBTPS1Q14703 1052 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 USH1GQ495M9 461 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 BRDTQ58F21 947 aaPredicted RBP12.03□□□□□ -0.48
COPS4-207ENST00000509317 BTNL9Q6UXG8 535 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
COPS4-207ENST00000509317 SEPT14Q6ZU15 432 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 DCAF4Q8WV16 495 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 TMEM47Q9BQJ4 181 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 TOMM22Q9NS69 142 aa12.03□□□□□ -0.48
COPS4-207ENST00000509317 C5orf42Q9H799 3197 aa12.02□□□□□ -0.48
COPS4-207ENST00000509317 TRIOO75962 3097 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.02□□□□□ -0.49
COPS4-207ENST00000509317 GJB5O95377 273 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 MMP3P08254 477 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 ZNF286BP0CG31 522 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 MS4A1P11836 297 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 CKBP12277 381 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 ERVK-21P61565 698 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 ARHGAP1Q07960 439 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 HIC1Q14526 733 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.49
COPS4-207ENST00000509317 CCDC62Q6P9F0 684 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 AFAP1L1Q8TED9 768 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 GPATCH3Q96I76 525 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 TGS1Q96RS0 853 aaKnown RBP12.02□□□□□ -0.49
COPS4-207ENST00000509317 RAD9AQ99638 391 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 ALG1Q9BT22 464 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 HDAC6Q9UBN7 1215 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 RAD50Q92878 1312 aa12.02□□□□□ -0.49
COPS4-207ENST00000509317 PRR33A8MZF0 331 aa12.01□□□□□ -0.49
COPS4-207ENST00000509317 NKRFO15226 690 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms