RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 HOMER1Q86YM7 354 aa18.22■□□□□ 0.51
COMMD8-202ENST00000509220 SCFD2Q8WU76 684 aa18.22■□□□□ 0.51
COMMD8-202ENST00000509220 TAAR1Q96RJ0 339 aa18.22■□□□□ 0.51
COMMD8-202ENST00000509220 LBHD1Q9BQE6 289 aaPredicted RBP18.22■□□□□ 0.51
COMMD8-202ENST00000509220 SPZ1Q9BXG8 430 aa18.22■□□□□ 0.51
COMMD8-202ENST00000509220 PPP4R2Q9NY27 417 aa18.22■□□□□ 0.51
COMMD8-202ENST00000509220 COL20A1Q9P218 1284 aa18.22■□□□□ 0.51
COMMD8-202ENST00000509220 MROH7Q68CQ1 1323 aa18.22■□□□□ 0.51
COMMD8-202ENST00000509220 CFBP00751 764 aa18.21■□□□□ 0.51
COMMD8-202ENST00000509220 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
COMMD8-202ENST00000509220 RMDN3Q96TC7 470 aa18.21■□□□□ 0.51
COMMD8-202ENST00000509220 UBE2OQ9C0C9 1292 aaKnown RBP18.21■□□□□ 0.51
COMMD8-202ENST00000509220 PDLIM7Q9NR12 457 aa18.21■□□□□ 0.51
COMMD8-202ENST00000509220 SLC12A7Q9Y666 1083 aa18.21■□□□□ 0.51
COMMD8-202ENST00000509220 A0A0U1RQG5 324 aaPredicted RBP18.2■□□□□ 0.5
COMMD8-202ENST00000509220 DCDC2CA8MYV0 355 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 CENPBP07199 599 aaPredicted RBP18.2■□□□□ 0.5
COMMD8-202ENST00000509220 HMGB1P09429 215 aaKnown RBP18.2■□□□□ 0.5
COMMD8-202ENST00000509220 CLTBP09497 229 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 CDK7P50613 346 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 BEX3Q00994 111 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
COMMD8-202ENST00000509220 STXBP2Q15833 593 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 ARHGEF16Q5VV41 709 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 DHX32Q7L7V1 743 aaKnown RBP18.2■□□□□ 0.5
COMMD8-202ENST00000509220 RASEFQ8IZ41 740 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 VTI1AQ96AJ9 217 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 RRP36Q96EU6 259 aaKnown RBP18.2■□□□□ 0.5
COMMD8-202ENST00000509220 MYL10Q9BUA6 226 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 SEZ6LQ9BYH1 1024 aa18.2■□□□□ 0.5
COMMD8-202ENST00000509220 ARVCFO00192 962 aa18.19■□□□□ 0.5
COMMD8-202ENST00000509220 PQBP1O60828 265 aaKnown RBP18.19■□□□□ 0.5
COMMD8-202ENST00000509220 REC8O95072 547 aa18.19■□□□□ 0.5
COMMD8-202ENST00000509220 MDM2Q00987 491 aaPredicted RBP18.19■□□□□ 0.5
COMMD8-202ENST00000509220 TTLL4Q14679 1199 aa18.19■□□□□ 0.5
COMMD8-202ENST00000509220 PPP2R5BQ15173 497 aa18.19■□□□□ 0.5
COMMD8-202ENST00000509220 TMEM63BQ5T3F8 832 aa18.19■□□□□ 0.5
COMMD8-202ENST00000509220 TDHQ8IZJ6 230 aa18.19■□□□□ 0.5
COMMD8-202ENST00000509220 KCNB2Q92953 911 aa18.19■□□□□ 0.5
COMMD8-202ENST00000509220 PRDM5Q9NQX1 630 aaPredicted RBP18.19■□□□□ 0.5
COMMD8-202ENST00000509220 PXMP2Q9NR77 195 aa18.19■□□□□ 0.5
COMMD8-202ENST00000509220 LTBP2Q14767 1821 aa18.19■□□□□ 0.5
COMMD8-202ENST00000509220 TRIM43BA6NCK2 446 aa18.18■□□□□ 0.5
COMMD8-202ENST00000509220 GCOM1H8Y6P7 765 aaPredicted RBP18.18■□□□□ 0.5
COMMD8-202ENST00000509220 KIAA0355O15063 1070 aa18.18■□□□□ 0.5
COMMD8-202ENST00000509220 EPB41L2O43491 1005 aaKnown RBP18.18■□□□□ 0.5
COMMD8-202ENST00000509220 POLR2MP0CAP2 368 aa18.18■□□□□ 0.5
COMMD8-202ENST00000509220 CPT1AP50416 773 aa18.18■□□□□ 0.5
COMMD8-202ENST00000509220 ADCK5Q3MIX3 580 aa18.18■□□□□ 0.5
COMMD8-202ENST00000509220 BRDTQ58F21 947 aaPredicted RBP18.18■□□□□ 0.5
COMMD8-202ENST00000509220 CXCL17Q6UXB2 119 aa18.18■□□□□ 0.5
COMMD8-202ENST00000509220 SYNE3Q6ZMZ3 975 aa18.18■□□□□ 0.5
COMMD8-202ENST00000509220 FANCBQ8NB91 859 aa18.18■□□□□ 0.5
COMMD8-202ENST00000509220 TRIM43Q96BQ3 446 aaPredicted RBP18.18■□□□□ 0.5
COMMD8-202ENST00000509220 LRRC2Q9BYS8 371 aa18.18■□□□□ 0.5
COMMD8-202ENST00000509220 SEC63Q9UGP8 760 aaKnown RBP18.18■□□□□ 0.5
COMMD8-202ENST00000509220 KIAA1217Q5T5P2 1943 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 EIF3JO75822 258 aaKnown RBP18.17■□□□□ 0.5
COMMD8-202ENST00000509220 NR3C2P08235 984 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 TXNP10599 105 aaKnown RBP18.17■□□□□ 0.5
COMMD8-202ENST00000509220 HSPA4P34932 840 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 FAAP100Q0VG06 881 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 CCDC62Q6P9F0 684 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 SH3RF1Q7Z6J0 888 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 SRBD1Q8N5C6 995 aaKnown RBP18.17■□□□□ 0.5
COMMD8-202ENST00000509220 SLC43A3Q8NBI5 491 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 OR6J1Q8NGC5 347 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 TMEM39AQ9NV64 488 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
COMMD8-202ENST00000509220 PLEKHA8P1O95397 391 aa18.16■□□□□ 0.5
COMMD8-202ENST00000509220 EIF2AK2P19525 551 aaKnown RBP18.16■□□□□ 0.5
COMMD8-202ENST00000509220 RXRAP19793 462 aa18.16■□□□□ 0.5
COMMD8-202ENST00000509220 PTGS1P23219 599 aa18.16■□□□□ 0.5
COMMD8-202ENST00000509220 LRIT3Q3SXY7 679 aa18.16■□□□□ 0.5
COMMD8-202ENST00000509220 APOA5Q6Q788 366 aa18.16■□□□□ 0.5
COMMD8-202ENST00000509220 PDCD2LQ9BRP1 358 aa18.16■□□□□ 0.5
COMMD8-202ENST00000509220 A6NJR5 290 aa18.15■□□□□ 0.5
COMMD8-202ENST00000509220 TLR3O15455 904 aaKnown RBP18.15■□□□□ 0.5
COMMD8-202ENST00000509220 KPNA6O60684 536 aa18.15■□□□□ 0.5
COMMD8-202ENST00000509220 HOXA13P31271 388 aaPredicted RBP18.15■□□□□ 0.5
COMMD8-202ENST00000509220 RCAN1P53805 252 aa18.15■□□□□ 0.5
COMMD8-202ENST00000509220 ITGA7Q13683 1181 aa18.15■□□□□ 0.5
COMMD8-202ENST00000509220 SEPT14Q6ZU15 432 aa18.15■□□□□ 0.5
COMMD8-202ENST00000509220 TMTC3Q6ZXV5 915 aa18.15■□□□□ 0.5
COMMD8-202ENST00000509220 MICU3Q86XE3 530 aa18.15■□□□□ 0.5
COMMD8-202ENST00000509220 PIBF1Q8WXW3 757 aa18.15■□□□□ 0.5
COMMD8-202ENST00000509220 BADQ92934 168 aa18.15■□□□□ 0.5
COMMD8-202ENST00000509220 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
COMMD8-202ENST00000509220 ARIH2O95376 493 aa18.14■□□□□ 0.49
COMMD8-202ENST00000509220 RAG1P15918 1043 aa18.14■□□□□ 0.49
COMMD8-202ENST00000509220 PURAQ00577 322 aaKnown RBP18.14■□□□□ 0.49
COMMD8-202ENST00000509220 PGM5Q15124 567 aa18.14■□□□□ 0.49
COMMD8-202ENST00000509220 KCNV1Q6PIU1 500 aa18.14■□□□□ 0.49
COMMD8-202ENST00000509220 VSIG10LQ86VR7 867 aa18.14■□□□□ 0.49
COMMD8-202ENST00000509220 FAM126BQ8IXS8 530 aa18.14■□□□□ 0.49
COMMD8-202ENST00000509220 PCDH10Q9P2E7 1040 aa18.14■□□□□ 0.49
COMMD8-202ENST00000509220 TBX21Q9UL17 535 aa18.14■□□□□ 0.49
COMMD8-202ENST00000509220 PIK3CDO00329 1044 aa18.13■□□□□ 0.49
COMMD8-202ENST00000509220 ZBTB43O43298 467 aa18.13■□□□□ 0.49
COMMD8-202ENST00000509220 GH1P01241 217 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms