RNA–Protein interactions for RNA: ENST00000509148.1

RACK1-221, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-221	ENST00000509148	RMDN3	Q96TC7	470 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	MTG1	Q9BT17	334 aa	Predicted RBP	11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	PPP1R12C	Q9BZL4	782 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	MTIF3	Q9H2K0	278 aa	Known RBP	11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	HIPK3	Q9H422	1215 aa		11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	MAP3K20	Q9NYL2	800 aa	Known RBP	11.61	□□□□□ -0.55
RACK1-221	ENST00000509148	LAMA4	Q16363	1823 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	COL6A3	P12111	3177 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	MCM3AP	O60318	1980 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	PALM3	A6NDB9	673 aa	Predicted RBP	11.6	□□□□□ -0.55
RACK1-221	ENST00000509148		E7EWF7	191 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	ZBTB5	O15062	677 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	MYL3	P08590	195 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	CSF2RA	P15509	400 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	PTGS1	P23219	599 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	PSMC6	P62333	389 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	PURA	Q00577	322 aa	Known RBP	11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	WTAP	Q15007	396 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	TMEM63B	Q5T3F8	832 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	CATIP	Q7Z7H3	387 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	STAG2	Q8N3U4	1231 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	MAP4K1	Q92918	833 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	FAM161B	Q96MY7	647 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.6	□□□□□ -0.55	9e-12	■■□□□ 13.6
RACK1-221	ENST00000509148	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	SEMA6B	Q9H3T3	888 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	MAD2L2	Q9UI95	211 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148	GRIN2D	O15399	1336 aa		11.6	□□□□□ -0.55
RACK1-221	ENST00000509148		A6NJR5	290 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	B4GALT4	O60513	344 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	EIF3J	O75822	258 aa	Known RBP	11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	CFB	P00751	764 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	CYP2C18	P33260	490 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	GRM4	Q14833	912 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	TMEM240	Q5SV17	173 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	RPUSD2	Q8IZ73	545 aa	Known RBP	11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	TBC1D5	Q92609	795 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	MTMR8	Q96EF0	704 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	GUCD1	Q96NT3	240 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	TAAR1	Q96RJ0	339 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	TRPV6	Q9H1D0	765 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	IL23A	Q9NPF7	189 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	PCDHA1	Q9Y5I3	950 aa		11.59	□□□□□ -0.55
RACK1-221	ENST00000509148	LRRC37A2	A6NM11	1700 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	GH1	P01241	217 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	FGB	P02675	491 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	EIF2AK2	P19525	551 aa	Known RBP	11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	HSD17B4	P51659	736 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	GHRHR	Q02643	423 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	PTPN11	Q06124	597 aa	Predicted RBP	11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	TMEM67	Q5HYA8	995 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	NFRKB	Q6P4R8	1299 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	CCDC62	Q6P9F0	684 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	CASC1	Q6TDU7	716 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	SEPT14	Q6ZU15	432 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	ZNF365	Q70YC5	407 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	MTA3	Q9BTC8	594 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	NOC4L	Q9BVI4	516 aa	Known RBP	11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	RIOX1	Q9H6W3	641 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	PXMP2	Q9NR77	195 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	COL20A1	Q9P218	1284 aa		11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	RBM8A	Q9Y5S9	174 aa	Known RBP	11.58	□□□□□ -0.56
RACK1-221	ENST00000509148	PNMA6F	A0A0J9YX94	578 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	ARIH2	O95376	493 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	NR3C2	P08235	984 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	ACR	P10323	421 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	DNAJB2	P25686	324 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	KIF5B	P33176	963 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	CCL23	P55773	120 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	TROAP	Q12815	778 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	NBPF20	Q3BBV1	942 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	FAM47C	Q5HY64	1035 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	KCNV1	Q6PIU1	500 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	C16orf59	Q7L2K0	433 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	HOMER1	Q86YM7	354 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	TMTC2	Q8N394	836 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	HERVK_113	Q902F9	699 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	COPS5	Q92905	334 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	MAP3K14	Q99558	947 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	CDX2	Q99626	313 aa	Predicted RBP	11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	MRVI1	Q9Y6F6	885 aa		11.57	□□□□□ -0.56
RACK1-221	ENST00000509148	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	PFKM	P08237	780 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	POLR2M	P0CAP2	368 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	CAST	P20810	708 aa	Known RBP	11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	MCM5	P33992	734 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	GNAQ	P50148	359 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	LAMC2	Q13753	1193 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	DGKD	Q16760	1214 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	LY6K	Q17RY6	165 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	RASIP1	Q5U651	963 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	STOX1	Q6ZVD7	989 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	CHST3	Q7LGC8	479 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	CTCFL	Q8NI51	663 aa	Predicted RBP	11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	IGDCC4	Q8TDY8	1250 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	AFG1L	Q8WV93	481 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	EMID1	Q96A84	441 aa	Predicted RBP	11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	TIFA	Q96CG3	184 aa		11.56	□□□□□ -0.56
RACK1-221	ENST00000509148	PIGS	Q96S52	555 aa		11.56	□□□□□ -0.56

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