RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 AMPD2Q01433 879 aa12.24□□□□□ -0.45
SEC31A-228ENST00000509142 MCM6Q14566 821 aa12.24□□□□□ -0.45
SEC31A-228ENST00000509142 NOA1Q8NC60 698 aaKnown RBP12.24□□□□□ -0.45
SEC31A-228ENST00000509142 ARFGAP3Q9NP61 516 aa12.24□□□□□ -0.45
SEC31A-228ENST00000509142 MYH1P12882 1939 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 RASSF10A6NK89 507 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 B4DLN1 442 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 N4BP1O75113 896 aaKnown RBP12.23□□□□□ -0.45
SEC31A-228ENST00000509142 CRKP46108 304 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 IKQ13123 557 aaPredicted RBP12.23□□□□□ -0.45
SEC31A-228ENST00000509142 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 NOC4LQ9BVI4 516 aaKnown RBP12.23□□□□□ -0.45
SEC31A-228ENST00000509142 PSTPIP2Q9H939 334 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 TTC26A0AVF1 554 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 POTEMA6NI47 508 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 NFIAQ12857 509 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 FKBP15Q5T1M5 1219 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 TTI2Q6NXR4 508 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 WDR59Q6PJI9 974 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 HHIPL2Q6UWX4 724 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 LARP4BQ92615 738 aaKnown RBP12.23□□□□□ -0.45
SEC31A-228ENST00000509142 MASTLQ96GX5 879 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 CTAGE9A4FU28 777 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 USP17L10C9JJH3 530 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 SLC37A4O43826 429 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 APBA3O96018 575 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 SHMT1P34896 483 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 SLC1A4P43007 532 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 ANKRD40Q6AI12 368 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
SEC31A-228ENST00000509142 PROM2Q8N271 834 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 MSANTD4Q8NCY6 345 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 HPS3Q969F9 1004 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 CNOT6LQ96LI5 555 aaKnown RBP12.23□□□□□ -0.45
SEC31A-228ENST00000509142 CCDC17Q96LX7 622 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 RAB21Q9UL25 225 aa12.23□□□□□ -0.45
SEC31A-228ENST00000509142 CCDC151A5D8V7 595 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 FAM196BA6NMK8 535 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 VSNL1P62760 191 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 NCAPH2Q6IBW4 605 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 UIMC1Q96RL1 719 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 RIC8AQ9NPQ8 531 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 STK17AQ9UEE5 414 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 DDX25Q9UHL0 483 aaKnown RBP12.22□□□□□ -0.45
SEC31A-228ENST00000509142 EPN1Q9Y6I3 576 aaPredicted RBP12.22□□□□□ -0.45
SEC31A-228ENST00000509142 NOVP48745 357 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 LRRC27Q9C0I9 530 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 ABCB6Q9NP58 842 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
SEC31A-228ENST00000509142 ZBTB5O15062 677 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 SLURP2P0DP57 97 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 APOBEC3HQ6NTF7 200 aaKnown RBP12.22□□□□□ -0.45
SEC31A-228ENST00000509142 PODNQ7Z5L7 613 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 ZNF507Q8TCN5 953 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 MMTAG2Q9BU76 263 aaKnown RBP12.22□□□□□ -0.45
SEC31A-228ENST00000509142 HDAC6Q9UBN7 1215 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 GUCA1BQ9UMX6 200 aa12.22□□□□□ -0.45
SEC31A-228ENST00000509142 A0A1W2PQC6 194 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 RHOXF2BP0C7M4 288 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 SNHG28P0DPA3 235 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 KLK7P49862 253 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 GRB10Q13322 594 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 CERKLQ49MI3 558 aaPredicted RBP12.21□□□□□ -0.45
SEC31A-228ENST00000509142 MTMR9Q96QG7 549 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 RHOXF2Q9BQY4 288 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 L1RE1Q9UN81 338 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 RCCD1A6NED2 376 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.451e-8■□□□□ 11.1
SEC31A-228ENST00000509142 PPP1R18Q6NYC8 613 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 KIAA1328Q86T90 577 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 KCNQ5Q9NR82 932 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 PCDHA12Q9UN75 941 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 PLIN4Q96Q06 1357 aa12.21□□□□□ -0.45
SEC31A-228ENST00000509142 IGKV6D-41A0A0C4DH26 115 aa12.21□□□□□ -0.46
SEC31A-228ENST00000509142 MYMKA6NI61 221 aa12.21□□□□□ -0.46
SEC31A-228ENST00000509142 FGFR1OPO95684 399 aaKnown RBP12.21□□□□□ -0.46
SEC31A-228ENST00000509142 HERVK_113P62684 666 aa12.21□□□□□ -0.46
SEC31A-228ENST00000509142 PDIA5Q14554 519 aa12.21□□□□□ -0.46
SEC31A-228ENST00000509142 C2CD5Q86YS7 1000 aa12.21□□□□□ -0.46
SEC31A-228ENST00000509142 DUSP9Q99956 384 aaKnown RBP12.21□□□□□ -0.46
SEC31A-228ENST00000509142 NUP58Q9BVL2 599 aa12.21□□□□□ -0.46
SEC31A-228ENST00000509142 NDUFA10O95299 355 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 FAM193AP78312 1265 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 SLFN13Q68D06 897 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 ZFPM1Q8IX07 1006 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 PDE11AQ9HCR9 933 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 PCDHA1Q9Y5I3 950 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 DDX60LQ5H9U9 1706 aaKnown RBP12.2□□□□□ -0.46
SEC31A-228ENST00000509142 UBR3Q6ZT12 1888 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 ENC1O14682 589 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 CAPN2P17655 700 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 UNC13DQ70J99 1090 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 HNRNPLLQ8WVV9 542 aaKnown RBP12.2□□□□□ -0.46
SEC31A-228ENST00000509142 NAPGQ99747 312 aaPredicted RBP12.2□□□□□ -0.46
SEC31A-228ENST00000509142 DHX36Q9H2U1 1008 aaKnown RBP12.2□□□□□ -0.46
SEC31A-228ENST00000509142 PI4KBQ9UBF8 816 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 ADAM21Q9UKJ8 722 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 MYO3BQ8WXR4 1341 aa12.2□□□□□ -0.46
SEC31A-228ENST00000509142 GOLGB1Q14789 3259 aaKnown RBP12.2□□□□□ -0.46
SEC31A-228ENST00000509142 H0YIN7 160 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms