RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 INTS3Q68E01 1043 aaKnown RBP4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 KRT27Q7Z3Y8 459 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 TTC6Q86TZ1 520 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 STK11IPQ8N1F8 1099 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 FAM169BQ8N8A8 192 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 VWCEQ96DN2 955 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 CARD11Q9BXL7 1154 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 ASPNQ9BXN1 380 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 MKRN2Q9H000 416 aaKnown RBP4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 SEMA3GQ9NS98 782 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 SNX11Q9Y5W9 270 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 SPATA31A1Q5TZJ5 1347 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 PITPNM2Q9BZ72 1349 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 CPDO75976 1380 aa4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 BLMP54132 1417 aaPredicted RBP4.88□□□□□ -1.63
UBE2D3-226ENST00000508635 NRKQ7Z2Y5 1582 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 PHRF1Q9P1Y6 1649 aaKnown RBP4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 CAMTA1Q9Y6Y1 1673 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 SHISA3A0PJX4 238 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 C9IYK1 514 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 TP53P04637 393 aaPredicted RBP4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 ETFBP38117 255 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 RNF4P78317 190 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 SNW1Q13573 536 aaKnown RBP4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 ZNF124Q15973 351 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 WFDC3Q8IUB2 231 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 ASB11Q8WXH4 323 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 DUSP15Q9H1R2 295 aaPredicted RBP4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 PAK6Q9NQU5 681 aaPredicted RBP4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 PRDM7Q9NQW5 492 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 PCDHB10Q9UN67 800 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 LTBP3Q9NS15 1303 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 SBNO2Q9Y2G9 1366 aa4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 CPSF1Q10570 1443 aaKnown RBP4.87□□□□□ -1.63
UBE2D3-226ENST00000508635 BRWD3Q6RI45 1802 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 A0A1W2PQH9 124 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 SMAD7O15105 426 aaKnown RBP4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 FGRP09769 529 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 TPP2P29144 1249 aaPredicted RBP4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 CCNFP41002 786 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 EVA1CP58658 441 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 PLCL1Q15111 1095 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 CLEC16AQ2KHT3 1053 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 NBPF9Q3BBW0 867 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 TMC3Q7Z5M5 1100 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 DEFB132Q7Z7B7 95 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 PPFIBP1Q86W92 1011 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 MCF2L2Q86YR7 1114 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 CREG2Q8IUH2 290 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 CCDC144CPQ8IYA2 1237 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 TAB3Q8N5C8 712 aaPredicted RBP4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 OR6P1Q8NGX9 317 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 PIWIL2Q8TC59 973 aaKnown RBP4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 DHRS1Q96LJ7 313 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 GPATCH2Q9NW75 528 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 USP35Q9P2H5 1018 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 SUCOQ9UBS9 1254 aaKnown RBP4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 FBXL21Q9UKT6 434 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 STRIP2Q9ULQ0 834 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 MINPP1Q9UNW1 487 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 TTC21BQ7Z4L5 1316 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 AATKQ6ZMQ8 1374 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 SLIT3O75094 1523 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 LMO7Q8WWI1 1683 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 THSD7AQ9UPZ6 1657 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 EP400Q96L91 3159 aa4.86□□□□□ -1.63
UBE2D3-226ENST00000508635 MEIS1O00470 390 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 PMS1P54277 932 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 ZP2Q05996 745 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 NMIQ13287 307 aaPredicted RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 GNPTABQ3T906 1256 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 AXDND1Q5T1B0 1012 aaPredicted RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 ANGEL2Q5VTE6 544 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 DCAF15Q66K64 600 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 TCP11L2Q8N4U5 519 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 SLC43A3Q8NBI5 491 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 PUS7Q96PZ0 661 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 TESK2Q96S53 571 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 PRDM14Q9GZV8 571 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 ASCC2Q9H1I8 757 aaPredicted RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 SLC12A5Q9H2X9 1139 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 TRIT1Q9H3H1 467 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 ZNF408Q9H9D4 720 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 CARS2Q9HA77 564 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 RAPGEFL1Q9UHV5 662 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 TTC21AQ8NDW8 1320 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 KTN1Q86UP2 1357 aaKnown RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 COL5A2P05997 1499 aaPredicted RBP4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 CD163L1Q9NR16 1453 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 PIK3C2AO00443 1686 aa4.85□□□□□ -1.63
UBE2D3-226ENST00000508635 AKAP12Q02952 1782 aa4.84□□□□□ -1.63
UBE2D3-226ENST00000508635 CRB1P82279 1406 aa4.84□□□□□ -1.63
UBE2D3-226ENST00000508635 ST20-MTHFSA0A0A6YYL1 179 aa4.84□□□□□ -1.63
UBE2D3-226ENST00000508635 SRFP11831 508 aa4.84□□□□□ -1.63
UBE2D3-226ENST00000508635 AUHQ13825 339 aaKnown RBP4.84□□□□□ -1.63
UBE2D3-226ENST00000508635 LARP1BQ659C4 914 aaKnown RBP4.84□□□□□ -1.63
UBE2D3-226ENST00000508635 THAP5Q7Z6K1 395 aa4.84□□□□□ -1.63
UBE2D3-226ENST00000508635 ARHGEF25Q86VW2 580 aa4.84□□□□□ -1.63
UBE2D3-226ENST00000508635 NME9Q86XW9 330 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms