RNA–Protein interactions for RNA: ENST00000508602.5

PTPN20-219, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-219ENST00000508602 RMDN1Q96DB5 314 aa11.69□□□□□ -0.54
PTPN20-219ENST00000508602 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
PTPN20-219ENST00000508602 CLDND1Q9NY35 253 aa11.69□□□□□ -0.54
PTPN20-219ENST00000508602 RALGAPA2Q2PPJ7 1873 aa11.69□□□□□ -0.54
PTPN20-219ENST00000508602 USP24Q9UPU5 2620 aa11.69□□□□□ -0.54
PTPN20-219ENST00000508602 WDR46O15213 610 aaKnown RBP11.68□□□□□ -0.54
PTPN20-219ENST00000508602 GJB5O95377 273 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 PLCD1P51178 756 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 TNFAIP2Q03169 654 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 DLX2Q07687 328 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-219ENST00000508602 CLUL1Q15846 466 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 NOL8Q76FK4 1167 aaKnown RBP11.68□□□□□ -0.54
PTPN20-219ENST00000508602 ADSSL1Q8N142 457 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPN20-219ENST00000508602 ASIC4Q96FT7 647 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 RAD9AQ99638 391 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 PRKD2Q9BZL6 878 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 RIPK3Q9Y572 518 aa11.68□□□□□ -0.54
PTPN20-219ENST00000508602 LCTP09848 1927 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 RBAK-RBAKDNI3L0D1 243 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 STXBP3O00186 592 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 MPHOSPH10O00566 681 aaKnown RBP11.67□□□□□ -0.54
PTPN20-219ENST00000508602 GABPAQ06546 454 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 TFCP2Q12800 502 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 GPNMBQ14956 572 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 DGLUCYQ7Z3D6 616 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 TTC6Q86TZ1 520 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 RPAINQ86UA6 219 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 CCDC144CPQ8IYA2 1237 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 NEUROD6Q96NK8 337 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 PPP1R9AQ9ULJ8 1098 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 MYO10Q9HD67 2058 aa11.67□□□□□ -0.54
PTPN20-219ENST00000508602 DYNC1LI2O43237 492 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-219ENST00000508602 KDM4AO75164 1064 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 SMPD1P17405 629 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 MLLT3P42568 568 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-219ENST00000508602 SLC4A3P48751 1232 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 SIGLEC14Q08ET2 396 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 LAPTM4AQ15012 233 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 PTPROQ16827 1216 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 TCTN1Q2MV58 587 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 CTC1Q2NKJ3 1217 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 TMEM63BQ5T3F8 832 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 TSHZ2Q9NRE2 1034 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 SNRKQ9NRH2 765 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 AKAP2Q9Y2D5 859 aa11.66□□□□□ -0.54
PTPN20-219ENST00000508602 ZEB2O60315 1214 aa11.65□□□□□ -0.54
PTPN20-219ENST00000508602 USP5P45974 858 aa11.65□□□□□ -0.54
PTPN20-219ENST00000508602 COPS2P61201 443 aa11.65□□□□□ -0.54
PTPN20-219ENST00000508602 SMAD4Q13485 552 aaKnown RBP11.65□□□□□ -0.54
PTPN20-219ENST00000508602 SNRNP48Q6IEG0 339 aaKnown RBP11.65□□□□□ -0.54
PTPN20-219ENST00000508602 FRMD5Q7Z6J6 570 aa11.65□□□□□ -0.54
PTPN20-219ENST00000508602 RETREG2Q8NC44 543 aa11.65□□□□□ -0.54
PTPN20-219ENST00000508602 NKD2Q969F2 451 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-219ENST00000508602 TEX13BQ9BXU2 312 aa11.65□□□□□ -0.54
PTPN20-219ENST00000508602 AP5M1Q9H0R1 490 aa11.65□□□□□ -0.54
PTPN20-219ENST00000508602 NSUN3Q9H649 340 aaKnown RBP11.65□□□□□ -0.54
PTPN20-219ENST00000508602 FASNP49327 2511 aaKnown RBP11.64□□□□□ -0.55
PTPN20-219ENST00000508602 BAZ2AQ9UIF9 1905 aaKnown RBP11.64□□□□□ -0.55
PTPN20-219ENST00000508602 PDGFBP01127 241 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-219ENST00000508602 EPC2Q52LR7 807 aa11.64□□□□□ -0.55
PTPN20-219ENST00000508602 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
PTPN20-219ENST00000508602 FAM117BQ6P1L5 589 aa11.64□□□□□ -0.55
PTPN20-219ENST00000508602 TMEM179Q6ZVK1 233 aa11.64□□□□□ -0.55
PTPN20-219ENST00000508602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTPN20-219ENST00000508602 MIGA1Q8NAN2 632 aa11.64□□□□□ -0.55
PTPN20-219ENST00000508602 PPP1R13LQ8WUF5 828 aa11.64□□□□□ -0.55
PTPN20-219ENST00000508602 FAM208BQ5VWN6 2430 aa11.64□□□□□ -0.55
PTPN20-219ENST00000508602 LOC730098B7Z3J9 87 aa11.63□□□□□ -0.55
PTPN20-219ENST00000508602 H3BNC9 293 aa11.63□□□□□ -0.55
PTPN20-219ENST00000508602 TBX10O75333 385 aa11.63□□□□□ -0.55
PTPN20-219ENST00000508602 CYP2E1P05181 493 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-219ENST00000508602 COL9A2Q14055 689 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-219ENST00000508602 KCNV2Q8TDN2 545 aa11.63□□□□□ -0.55
PTPN20-219ENST00000508602 CRBNQ96SW2 442 aa11.63□□□□□ -0.55
PTPN20-219ENST00000508602 ARHGEF10LQ9HCE6 1279 aa11.63□□□□□ -0.55
PTPN20-219ENST00000508602 PDGFCQ9NRA1 345 aa11.63□□□□□ -0.55
PTPN20-219ENST00000508602 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.63□□□□□ -0.55
PTPN20-219ENST00000508602 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
PTPN20-219ENST00000508602 FRYLO94915 3013 aa11.63□□□□□ -0.55
PTPN20-219ENST00000508602 UQCRFS1P1P0C7P4 283 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 CYP7A1P22680 504 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 PURAQ00577 322 aaKnown RBP11.62□□□□□ -0.55
PTPN20-219ENST00000508602 CNTN2Q02246 1040 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 ICA1Q05084 483 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 GPM6BQ13491 265 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 BFSP2Q13515 415 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 CBX2Q14781 532 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-219ENST00000508602 LRRFIP1Q32MZ4 808 aaKnown RBP11.62□□□□□ -0.55
PTPN20-219ENST00000508602 FAM47CQ5HY64 1035 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 CNKSR3Q6P9H4 555 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 COL26A1Q96A83 441 aa11.62□□□□□ -0.55
PTPN20-219ENST00000508602 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms