RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 LRCH3Q96II8 777 aa14.11□□□□□ -0.15
CLDND1-218ENST00000508503 TMEM87BQ96K49 555 aa14.11□□□□□ -0.15
CLDND1-218ENST00000508503 GPHNQ9NQX3 736 aaPredicted RBP14.11□□□□□ -0.15
CLDND1-218ENST00000508503 TMEM39AQ9NV64 488 aa14.11□□□□□ -0.15
CLDND1-218ENST00000508503 PNMA6FA0A0J9YX94 578 aa14.1□□□□□ -0.15
CLDND1-218ENST00000508503 A6NJR5 290 aa14.1□□□□□ -0.15
CLDND1-218ENST00000508503 PRC1O43663 620 aa14.1□□□□□ -0.15
CLDND1-218ENST00000508503 DHX16O60231 1041 aaKnown RBP14.1□□□□□ -0.15
CLDND1-218ENST00000508503 ZEB2O60315 1214 aa14.1□□□□□ -0.15
CLDND1-218ENST00000508503 PQBP1O60828 265 aaKnown RBP14.1□□□□□ -0.15
CLDND1-218ENST00000508503 CXCL17Q6UXB2 119 aa14.1□□□□□ -0.15
CLDND1-218ENST00000508503 FAM126BQ8IXS8 530 aa14.1□□□□□ -0.15
CLDND1-218ENST00000508503 PIGSQ96S52 555 aa14.1□□□□□ -0.15
CLDND1-218ENST00000508503 RMDN3Q96TC7 470 aa14.1□□□□□ -0.15
CLDND1-218ENST00000508503 PCDHA1Q9Y5I3 950 aa14.1□□□□□ -0.15
CLDND1-218ENST00000508503 SH2B2O14492 632 aaPredicted RBP14.09□□□□□ -0.15
CLDND1-218ENST00000508503 DDAH1O94760 285 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 TIMP1P01033 207 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 ITGA7Q13683 1181 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 SHHQ15465 462 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 STXBP2Q15833 593 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 ZNF654Q8IZM8 581 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 VTI1AQ96AJ9 217 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 SPZ1Q9BXG8 430 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 ANO2Q9NQ90 1003 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 PRDM5Q9NQX1 630 aaPredicted RBP14.09□□□□□ -0.15
CLDND1-218ENST00000508503 PXMP2Q9NR77 195 aa14.09□□□□□ -0.15
CLDND1-218ENST00000508503 KIAA1217Q5T5P2 1943 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 A0A0C4DFX4 3053 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 KPNA6O60684 536 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 EIF3JO75822 258 aaKnown RBP14.08□□□□□ -0.16
CLDND1-218ENST00000508503 ARIH2O95376 493 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 CFBP00751 764 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 NR3C2P08235 984 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 TXNP10599 105 aaKnown RBP14.08□□□□□ -0.16
CLDND1-218ENST00000508503 RAG1P15918 1043 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 CPT1AP50416 773 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 EXOSC10Q01780 885 aaKnown RBP14.08□□□□□ -0.16
CLDND1-218ENST00000508503 CASC1Q6TDU7 716 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 VSIG10LQ86VR7 867 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 LZTS2Q9BRK4 669 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 POLR3EQ9NVU0 708 aa14.08□□□□□ -0.16
CLDND1-218ENST00000508503 CDC45O75419 566 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 KIF5BP33176 963 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 EPHB4P54760 987 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 PURAQ00577 322 aaKnown RBP14.07□□□□□ -0.16
CLDND1-218ENST00000508503 TTLL4Q14679 1199 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 PPP2R5BQ15173 497 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 C9orf50Q5SZB4 431 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 RNF20Q5VTR2 975 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 FAM109BQ6ICB4 259 aaPredicted RBP14.07□□□□□ -0.16
CLDND1-218ENST00000508503 MFSD5Q6N075 450 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 SGMS1Q86VZ5 419 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 KCNB2Q92953 911 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 SCN10AQ9Y5Y9 1956 aa14.07□□□□□ -0.16
CLDND1-218ENST00000508503 TLR3O15455 904 aaKnown RBP14.06□□□□□ -0.16
CLDND1-218ENST00000508503 RGS20O76081 388 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 CALM1P0DP23 149 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 CALM2P0DP24 149 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 CALM3P0DP25 149 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 GNAQP50148 359 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 ARHGEF16Q5VV41 709 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 HOMER1Q86YM7 354 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 RASEFQ8IZ41 740 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 SRBD1Q8N5C6 995 aaKnown RBP14.06□□□□□ -0.16
CLDND1-218ENST00000508503 OR6J1Q8NGC5 347 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 CTCFLQ8NI51 663 aaPredicted RBP14.06□□□□□ -0.16
CLDND1-218ENST00000508503 COPS5Q92905 334 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 EMID1Q96A84 441 aaPredicted RBP14.06□□□□□ -0.16
CLDND1-218ENST00000508503 PDCD2LQ9BRP1 358 aa14.06□□□□□ -0.16
CLDND1-218ENST00000508503 DDX41Q9UJV9 622 aaKnown RBP14.06□□□□□ -0.16
CLDND1-218ENST00000508503 GCOM1H8Y6P7 765 aaPredicted RBP14.05□□□□□ -0.16
CLDND1-218ENST00000508503 POLR2MP0CAP2 368 aa14.05□□□□□ -0.16
CLDND1-218ENST00000508503 EIF2AK2P19525 551 aaKnown RBP14.05□□□□□ -0.16
CLDND1-218ENST00000508503 FPGSQ05932 587 aa14.05□□□□□ -0.16
CLDND1-218ENST00000508503 ARHGAP1Q07960 439 aa14.05□□□□□ -0.16
CLDND1-218ENST00000508503 BRDTQ58F21 947 aaPredicted RBP14.05□□□□□ -0.16
CLDND1-218ENST00000508503 C16orf59Q7L2K0 433 aa14.05□□□□□ -0.16
CLDND1-218ENST00000508503 FANCBQ8NB91 859 aa14.05□□□□□ -0.16
CLDND1-218ENST00000508503 NEK1Q96PY6 1258 aa14.05□□□□□ -0.16
CLDND1-218ENST00000508503 MTG1Q9BT17 334 aaPredicted RBP14.05□□□□□ -0.16
CLDND1-218ENST00000508503 MYL10Q9BUA6 226 aa14.05□□□□□ -0.16
CLDND1-218ENST00000508503 CHD9Q3L8U1 2897 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 CCDC69A6NI79 296 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 PIK3CDO00329 1044 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 GH1P01241 217 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 TGFB3P10600 412 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 HOXA13P31271 388 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-218ENST00000508503 PSMC6P62333 389 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 PGM5Q15124 567 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 LY6KQ17RY6 165 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 SEPT14Q6ZU15 432 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 DHX32Q7L7V1 743 aaKnown RBP14.04□□□□□ -0.16
CLDND1-218ENST00000508503 RRP36Q96EU6 259 aaKnown RBP14.04□□□□□ -0.16
CLDND1-218ENST00000508503 TRPV6Q9H1D0 765 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 ALDH8A1Q9H2A2 487 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-218ENST00000508503 FRMPD4Q14CM0 1322 aa14.04□□□□□ -0.16
CLDND1-218ENST00000508503 MEIS2O14770 477 aa14.03□□□□□ -0.16
CLDND1-218ENST00000508503 B4GALT4O60513 344 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms