RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ANTXR2P58335 489 aa18.92■□□□□ 0.62
LMNA-222ENST00000508500 PDE4DQ08499 809 aa18.92■□□□□ 0.62
LMNA-222ENST00000508500 COL9A3Q14050 684 aaPredicted RBP18.92■□□□□ 0.62
LMNA-222ENST00000508500 CHST3Q7LGC8 479 aa18.92■□□□□ 0.62
LMNA-222ENST00000508500 SKAP1Q86WV1 359 aa18.92■□□□□ 0.62
LMNA-222ENST00000508500 FBXO11Q86XK2 927 aa18.92■□□□□ 0.62
LMNA-222ENST00000508500 U3KPZ7 1027 aaPredicted RBP18.92■□□□□ 0.62
LMNA-222ENST00000508500 UMODL1Q5DID0 1318 aa18.92■□□□□ 0.62
LMNA-222ENST00000508500 DOCK5Q9H7D0 1870 aa18.92■□□□□ 0.62
LMNA-222ENST00000508500 B4GALT4O60513 344 aa18.91■□□□□ 0.62
LMNA-222ENST00000508500 CSF2RAP15509 400 aa18.91■□□□□ 0.62
LMNA-222ENST00000508500 PURAQ00577 322 aaKnown RBP18.91■□□□□ 0.62
LMNA-222ENST00000508500 RNPC3Q96LT9 517 aaKnown RBP18.91■□□□□ 0.62
LMNA-222ENST00000508500 MAF1Q9H063 256 aa18.91■□□□□ 0.62
LMNA-222ENST00000508500 TRPV6Q9H1D0 765 aa18.91■□□□□ 0.62
LMNA-222ENST00000508500 TET1Q8NFU7 2136 aa18.91■□□□□ 0.62
LMNA-222ENST00000508500 TLR3O15455 904 aaKnown RBP18.9■□□□□ 0.62
LMNA-222ENST00000508500 CYTH3O43739 400 aa18.9■□□□□ 0.62
LMNA-222ENST00000508500 DHX16O60231 1041 aaKnown RBP18.9■□□□□ 0.62
LMNA-222ENST00000508500 ZEB2O60315 1214 aa18.9■□□□□ 0.62
LMNA-222ENST00000508500 CYP2C18P33260 490 aa18.9■□□□□ 0.62
LMNA-222ENST00000508500 GRM4Q14833 912 aa18.9■□□□□ 0.62
LMNA-222ENST00000508500 TMEM240Q5SV17 173 aa18.9■□□□□ 0.62
LMNA-222ENST00000508500 CCDC62Q6P9F0 684 aa18.9■□□□□ 0.62
LMNA-222ENST00000508500 OR6J1Q8NGC5 347 aa18.9■□□□□ 0.62
LMNA-222ENST00000508500 TMEM265A0A087WTH1 108 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 IFIT3O14879 490 aaKnown RBP18.89■□□□□ 0.61
LMNA-222ENST00000508500 ACRP10323 421 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 GHRHRQ02643 423 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 TROAPQ12815 778 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 TRDNQ13061 729 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 PPP2R5BQ15173 497 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 MB21D2Q8IYB1 491 aaPredicted RBP18.89■□□□□ 0.61
LMNA-222ENST00000508500 NCOA7Q8NI08 942 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 IGDCC4Q8TDY8 1250 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 SCFD2Q8WU76 684 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 PPP1R13LQ8WUF5 828 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 VWCEQ96DN2 955 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 RIOX1Q9H6W3 641 aa18.89■□□□□ 0.61
LMNA-222ENST00000508500 MRPL11Q9Y3B7 192 aaKnown RBP18.89■□□□□ 0.61
LMNA-222ENST00000508500 RBM8AQ9Y5S9 174 aaKnown RBP18.89■□□□□ 0.61
LMNA-222ENST00000508500 TANC1Q9C0D5 1861 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 A6NJR5 290 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 ZBTB5O15062 677 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 MYL3P08590 195 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 TXNP10599 105 aaKnown RBP18.88■□□□□ 0.61
LMNA-222ENST00000508500 RASIP1Q5U651 963 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 MYLIPQ8WY64 445 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 PIGSQ96S52 555 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 NOC4LQ9BVI4 516 aaKnown RBP18.88■□□□□ 0.61
LMNA-222ENST00000508500 AMNQ9BXJ7 453 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 LSG1Q9H089 658 aaKnown RBP18.88■□□□□ 0.61
LMNA-222ENST00000508500 WNT8AQ9H1J5 351 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 GPHNQ9NQX3 736 aaPredicted RBP18.88■□□□□ 0.61
LMNA-222ENST00000508500 POLR3EQ9NVU0 708 aa18.88■□□□□ 0.61
LMNA-222ENST00000508500 NKRFO15226 690 aaKnown RBP eCLIP18.87■□□□□ 0.61
LMNA-222ENST00000508500 CFBP00751 764 aa18.87■□□□□ 0.61
LMNA-222ENST00000508500 CPT1AP50416 773 aa18.87■□□□□ 0.61
LMNA-222ENST00000508500 HSD17B4P51659 736 aa18.87■□□□□ 0.61
LMNA-222ENST00000508500 PPIGQ13427 754 aaKnown RBP eCLIP18.87■□□□□ 0.612e-8■■■□□ 17.3
LMNA-222ENST00000508500 ZNF365Q70YC5 407 aa18.87■□□□□ 0.61
LMNA-222ENST00000508500 MCF2L2Q86YR7 1114 aa18.87■□□□□ 0.61
LMNA-222ENST00000508500 TMEM199Q8N511 208 aa18.87■□□□□ 0.61
LMNA-222ENST00000508500 MAFAQ8NHW3 353 aaPredicted RBP18.87■□□□□ 0.61
LMNA-222ENST00000508500 NSUN6Q8TEA1 469 aaKnown RBP18.87■□□□□ 0.61
LMNA-222ENST00000508500 RMDN3Q96TC7 470 aa18.87■□□□□ 0.61
LMNA-222ENST00000508500 MPHOSPH6Q99547 160 aaKnown RBP18.87■□□□□ 0.61
LMNA-222ENST00000508500 ALDH8A1Q9H2A2 487 aaPredicted RBP18.87■□□□□ 0.61
LMNA-222ENST00000508500 TRMT13Q9NUP7 481 aaKnown RBP18.87■□□□□ 0.61
LMNA-222ENST00000508500 EIF2AK2P19525 551 aaKnown RBP18.86■□□□□ 0.61
LMNA-222ENST00000508500 TTLL4Q14679 1199 aa18.86■□□□□ 0.61
LMNA-222ENST00000508500 WTAPQ15007 396 aa18.86■□□□□ 0.61
LMNA-222ENST00000508500 LY6KQ17RY6 165 aa18.86■□□□□ 0.61
LMNA-222ENST00000508500 SEPT14Q6ZU15 432 aa18.86■□□□□ 0.61
LMNA-222ENST00000508500 RALYLQ86SE5 291 aaKnown RBP18.86■□□□□ 0.61
LMNA-222ENST00000508500 IWS1Q96ST2 819 aa18.86■□□□□ 0.61
LMNA-222ENST00000508500 MTG1Q9BT17 334 aaPredicted RBP18.86■□□□□ 0.61
LMNA-222ENST00000508500 SEZ6LQ9BYH1 1024 aa18.86■□□□□ 0.61
LMNA-222ENST00000508500 HIPK3Q9H422 1215 aa18.86■□□□□ 0.61
LMNA-222ENST00000508500 PXMP2Q9NR77 195 aa18.86■□□□□ 0.61
LMNA-222ENST00000508500 CHD7Q9P2D1 2997 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 PTPRSQ13332 1948 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 GRXCR1A8MXD5 290 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 B4DLN1 442 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 RGS20O76081 388 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 MRPL12P52815 198 aaKnown RBP18.85■□□□□ 0.61
LMNA-222ENST00000508500 CCL23P55773 120 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 ARHGAP1Q07960 439 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 NBPF20Q3BBV1 942 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 HOMER1Q86YM7 354 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 ESYT1Q9BSJ8 1104 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 LY9Q9HBG7 655 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 IL23AQ9NPF7 189 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 PCDHA1Q9Y5I3 950 aa18.85■□□□□ 0.61
LMNA-222ENST00000508500 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.84■□□□□ 0.61
LMNA-222ENST00000508500 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.84■□□□□ 0.61
LMNA-222ENST00000508500 ERICH2A1L162 156 aa18.84■□□□□ 0.61
LMNA-222ENST00000508500 NR3C2P08235 984 aa18.84■□□□□ 0.61
LMNA-222ENST00000508500 CYP2C9P11712 490 aa18.84■□□□□ 0.61
LMNA-222ENST00000508500 HOXA13P31271 388 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms