RNA–Protein interactions for RNA: ENST00000508385.5

SH3BP2-213, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-213ENST00000508385 PBX2P40425 430 aa17.05■□□□□ 0.32
SH3BP2-213ENST00000508385 ANTXR2P58335 489 aa17.05■□□□□ 0.32
SH3BP2-213ENST00000508385 RPS6P62753 249 aaKnown RBP17.05■□□□□ 0.32
SH3BP2-213ENST00000508385 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
SH3BP2-213ENST00000508385 NCOA7Q8NI08 942 aa17.05■□□□□ 0.32
SH3BP2-213ENST00000508385 IL17RAQ96F46 866 aa17.05■□□□□ 0.32
SH3BP2-213ENST00000508385 PBX4Q9BYU1 374 aa17.05■□□□□ 0.32
SH3BP2-213ENST00000508385 CPVLQ9H3G5 476 aa17.05■□□□□ 0.32
SH3BP2-213ENST00000508385 SNHG28P0DPA3 235 aa17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 CPT1AP50416 773 aa17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 TRDNQ13061 729 aa17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 PPP2R5BQ15173 497 aa17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 GPATCH4Q5T3I0 446 aaKnown RBP17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 IQCA1Q86XH1 822 aa17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 PNMA1Q8ND90 353 aa17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 UBA5Q9GZZ9 404 aa17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 MTIF3Q9H2K0 278 aaKnown RBP17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 KAT14Q9H8E8 782 aa17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 GPHNQ9NQX3 736 aaPredicted RBP17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 POLR3EQ9NVU0 708 aa17.04■□□□□ 0.32
SH3BP2-213ENST00000508385 WDR19Q8NEZ3 1342 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 LOC102724159A0A0B4J2E5 919 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 FGBP02675 491 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 KRT32Q14532 448 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 PWP2Q15269 919 aaKnown RBP17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 BRDTQ58F21 947 aaPredicted RBP17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 FAM47CQ5HY64 1035 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 OTOP2Q7RTS6 562 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 RALYLQ86SE5 291 aaKnown RBP17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 ANKS1AQ92625 1134 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 NOC4LQ9BVI4 516 aaKnown RBP17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 SEZ6LQ9BYH1 1024 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 WNT8AQ9H1J5 351 aa17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 ALDH8A1Q9H2A2 487 aaPredicted RBP17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 CXXC1Q9P0U4 656 aaPredicted RBP17.03■□□□□ 0.32
SH3BP2-213ENST00000508385 DHX16O60231 1041 aaKnown RBP17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 EXOSC10Q01780 885 aaKnown RBP17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 SEC23AQ15436 765 aa17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 CDC37Q16543 378 aaPredicted RBP17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 CCDC178Q5BJE1 867 aa17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 RASIP1Q5U651 963 aa17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 DGKHQ86XP1 1220 aa17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 DNERQ8NFT8 737 aa17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 SCFD2Q8WU76 684 aa17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 HERVK_113Q902F9 699 aa17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 SCLYQ96I15 445 aa17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 TRMT13Q9NUP7 481 aaKnown RBP17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 MSRAQ9UJ68 235 aa17.02■□□□□ 0.32
SH3BP2-213ENST00000508385 RBM47A0AV96 593 aaKnown RBP17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 ZBBXA8MT70 800 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 B4DLN1 442 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 CYP2C9P11712 490 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 MRPL12P52815 198 aaKnown RBP17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 CHMP4BP1P59074 171 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 ANAPC15P60006 121 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 PURAQ00577 322 aaKnown RBP17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 RAB30Q15771 203 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 CHST3Q7LGC8 479 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 ENAHQ8N8S7 591 aaPredicted RBP17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 IGDCC4Q8TDY8 1250 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 PPP1R13LQ8WUF5 828 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 COPS5Q92905 334 aa17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 JAKMIP1Q96N16 626 aaKnown RBP17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 GAS2L1Q99501 681 aaPredicted RBP17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 MTG1Q9BT17 334 aaPredicted RBP17.01■□□□□ 0.31
SH3BP2-213ENST00000508385 TNKSO95271 1327 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 LCTP09848 1927 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 NKRFO15226 690 aaKnown RBP eCLIP17■□□□□ 0.319e-7■■□□□ 12.4
SH3BP2-213ENST00000508385 PRC1O43663 620 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 SUPT20HL2P0C7V6 817 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 TXNP10599 105 aaKnown RBP17■□□□□ 0.31
SH3BP2-213ENST00000508385 EDNRBP24530 442 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 USP38Q8NB14 1042 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 PPM1EQ8WY54 764 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 MTA3Q9BTC8 594 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 NKX2-4Q9H2Z4 354 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 PRDM12Q9H4Q4 367 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 VCANP13611 3396 aa17■□□□□ 0.31
SH3BP2-213ENST00000508385 CPA1P15085 419 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 MCM5P33992 734 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 TTLL4Q14679 1199 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 NBPF20Q3BBV1 942 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 ASPRV1Q53RT3 343 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 DHX32Q7L7V1 743 aaKnown RBP16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 RPUSD2Q8IZ73 545 aaKnown RBP16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 ADGRF4Q8IZF3 695 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 KIF2CQ99661 725 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 UBAC1Q9BSL1 405 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 TM6SF1Q9BZW5 370 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 SENP2Q9HC62 589 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 ZSWIM6Q9HCJ5 1215 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 VAT1LQ9HCJ6 419 aa16.99■□□□□ 0.31
SH3BP2-213ENST00000508385 ABCB11O95342 1321 aa16.98■□□□□ 0.31
SH3BP2-213ENST00000508385 CUL9Q8IWT3 2517 aa16.98■□□□□ 0.31
SH3BP2-213ENST00000508385 IFIT3O14879 490 aaKnown RBP16.98■□□□□ 0.31
SH3BP2-213ENST00000508385 ARIH2O95376 493 aa16.98■□□□□ 0.31
SH3BP2-213ENST00000508385 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms