RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 KCNA4P22459 653 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 GNAQP50148 359 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 TLE2Q04725 743 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 PPP2R5BQ15173 497 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 FSCN1Q16658 493 aaKnown RBP10.86□□□□□ -0.67
DDX41-209ENST00000508279 SRBD1Q8N5C6 995 aaKnown RBP10.86□□□□□ -0.67
DDX41-209ENST00000508279 FANCBQ8NB91 859 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 RGS22Q8NE09 1264 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 OR6J1Q8NGC5 347 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 MORC4Q8TE76 937 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 NSUN6Q8TEA1 469 aaKnown RBP10.86□□□□□ -0.67
DDX41-209ENST00000508279 COPS5Q92905 334 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 ZFP91Q96JP5 570 aaPredicted RBP10.86□□□□□ -0.67
DDX41-209ENST00000508279 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
DDX41-209ENST00000508279 UPF3AQ9H1J1 476 aaKnown RBP10.86□□□□□ -0.67
DDX41-209ENST00000508279 GNEQ9Y223 722 aaKnown RBP10.86□□□□□ -0.67
DDX41-209ENST00000508279 SNX14Q9Y5W7 946 aa10.86□□□□□ -0.67
DDX41-209ENST00000508279 LOC102724159A0A0B4J2E5 919 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 KLF18A0A0U1RQI7 1052 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 GOLGA8AA7E2F4 631 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 GOLGA8BA8MQT2 603 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 GCOM1H8Y6P7 765 aaPredicted RBP10.85□□□□□ -0.67
DDX41-209ENST00000508279 OPLAHO14841 1288 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 ZBTB43O43298 467 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 ZEB2O60315 1214 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 SORBS3O60504 671 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 MYL3P08590 195 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 HMGB1P09429 215 aaKnown RBP10.85□□□□□ -0.67
DDX41-209ENST00000508279 POLR2MP0CAP2 368 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 TXNP10599 105 aaKnown RBP10.85□□□□□ -0.67
DDX41-209ENST00000508279 CASTP20810 708 aaKnown RBP10.85□□□□□ -0.67
DDX41-209ENST00000508279 CST5P28325 142 aaPredicted RBP10.85□□□□□ -0.67
DDX41-209ENST00000508279 HSPA4P34932 840 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 CHMP4BP1P59074 171 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 EXOSC10Q01780 885 aaKnown RBP10.85□□□□□ -0.67
DDX41-209ENST00000508279 TRAF1Q13077 416 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 PWP2Q15269 919 aaKnown RBP10.85□□□□□ -0.67
DDX41-209ENST00000508279 STXBP2Q15833 593 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 RTN1Q16799 776 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 TSGA10IPQ3SY00 556 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 DUSP28Q4G0W2 176 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 APOA5Q6Q788 366 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 BLOC1S2Q6QNY1 142 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 CXCL17Q6UXB2 119 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 Q6ZUG5 572 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 SH3RF1Q7Z6J0 888 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 SCFD2Q8WU76 684 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 MAP3K14Q99558 947 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 LZTS2Q9BRK4 669 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 SPZ1Q9BXG8 430 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 UBE2OQ9C0C9 1292 aaKnown RBP10.85□□□□□ -0.67
DDX41-209ENST00000508279 PXMP2Q9NR77 195 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 BRPF3Q9ULD4 1205 aa10.85□□□□□ -0.67
DDX41-209ENST00000508279 A0A0U1RQG5 324 aaPredicted RBP10.84□□□□□ -0.67
DDX41-209ENST00000508279 CTAGE5O15320 804 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 NR3C2P08235 984 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 EDNRBP24530 442 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 HSD17B4P51659 736 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 APOBRQ0VD83 1088 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 TTLL4Q14679 1199 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 LY6KQ17RY6 165 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 CCSAPQ6IQ19 270 aaPredicted RBP10.84□□□□□ -0.67
DDX41-209ENST00000508279 SGMS1Q86VZ5 419 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 SMARCC2Q8TAQ2 1214 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 CUL5Q93034 780 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 IWS1Q96ST2 819 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 DOCK5Q9H7D0 1870 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 LTBP2Q14767 1821 aa10.84□□□□□ -0.67
DDX41-209ENST00000508279 DCDC2CA8MYV0 355 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 ARIH2O95376 493 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 CLTBP09497 229 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 PSMA5P28066 241 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 PSMC6P62333 389 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 SNX17Q15036 470 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 BRDTQ58F21 947 aaPredicted RBP10.83□□□□□ -0.68
DDX41-209ENST00000508279 USP17L6PQ6QN14 398 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 TMTC3Q6ZXV5 915 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 HEATR3Q7Z4Q2 680 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 IL31RAQ8NI17 732 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 PPP1R13LQ8WUF5 828 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 GPKOWQ92917 476 aaPredicted RBP eCLIP10.83□□□□□ -0.68
DDX41-209ENST00000508279 BADQ92934 168 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 BRF1Q92994 677 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 GDF15Q99988 308 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 PDCD2LQ9BRP1 358 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 PDLIM7Q9NR12 457 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 TMEM39AQ9NV64 488 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 RBM28Q9NW13 759 aaKnown RBP10.83□□□□□ -0.68
DDX41-209ENST00000508279 Q9Y3F1 56 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 MRVI1Q9Y6F6 885 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 ELP1O95163 1332 aa10.83□□□□□ -0.68
DDX41-209ENST00000508279 RBM47A0AV96 593 aaKnown RBP10.82□□□□□ -0.68
DDX41-209ENST00000508279 TRIM43BA6NCK2 446 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 ARVCFO00192 962 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 NKRFO15226 690 aaKnown RBP eCLIP10.82□□□□□ -0.68
DDX41-209ENST00000508279 EIF3JO75822 258 aaKnown RBP10.82□□□□□ -0.68
DDX41-209ENST00000508279 RAG1P15918 1043 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 RPS6KB1P23443 525 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 SMARCA1P28370 1054 aa10.82□□□□□ -0.68
DDX41-209ENST00000508279 CCND2P30279 289 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms