RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SLC43A3Q8NBI5 491 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 MPHOSPH6Q99547 160 aaKnown RBP16.62■□□□□ 0.25
RAB28-205ENST00000508274 PPP1R12CQ9BZL4 782 aa16.62■□□□□ 0.25
RAB28-205ENST00000508274 MRPL11Q9Y3B7 192 aaKnown RBP16.62■□□□□ 0.25
RAB28-205ENST00000508274 SCN10AQ9Y5Y9 1956 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 ZBTB5O15062 677 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 CYTH3O43739 400 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 CFBP00751 764 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 TROAPQ12815 778 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 CENPQQ7L2Z9 268 aaPredicted RBP16.61■□□□□ 0.25
RAB28-205ENST00000508274 MCF2L2Q86YR7 1114 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 IGDCC4Q8TDY8 1250 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 SCFD2Q8WU76 684 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 RMDN3Q96TC7 470 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 AMNQ9BXJ7 453 aa16.61■□□□□ 0.25
RAB28-205ENST00000508274 TLR3O15455 904 aaKnown RBP16.6■□□□□ 0.25
RAB28-205ENST00000508274 EIF2AK2P19525 551 aaKnown RBP16.6■□□□□ 0.25
RAB28-205ENST00000508274 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
RAB28-205ENST00000508274 PPP1R13LQ8WUF5 828 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 PIGSQ96S52 555 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 MYL10Q9BUA6 226 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 MTMR10Q9NXD2 777 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 UMODL1Q5DID0 1318 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 B4GALT4O60513 344 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 MYL3P08590 195 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 TXNP10599 105 aaKnown RBP16.6■□□□□ 0.25
RAB28-205ENST00000508274 CPT1AP50416 773 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 PURAQ00577 322 aaKnown RBP16.6■□□□□ 0.25
RAB28-205ENST00000508274 MFSD5Q6N075 450 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 NSUN6Q8TEA1 469 aaKnown RBP16.6■□□□□ 0.25
RAB28-205ENST00000508274 RNPC3Q96LT9 517 aaKnown RBP16.6■□□□□ 0.25
RAB28-205ENST00000508274 FAM161BQ96MY7 647 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 TRPV6Q9H1D0 765 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 RIOX1Q9H6W3 641 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 PCDHA1Q9Y5I3 950 aa16.6■□□□□ 0.25
RAB28-205ENST00000508274 B4DLN1 442 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 SLC27A2O14975 620 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 NKRFO15226 690 aaKnown RBP eCLIP16.59■□□□□ 0.25
RAB28-205ENST00000508274 CSF2RAP15509 400 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 CYP2C18P33260 490 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 HSD17B4P51659 736 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 MRPL12P52815 198 aaKnown RBP16.59■□□□□ 0.25
RAB28-205ENST00000508274 TTLL4Q14679 1199 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 BMP2KLQ5H9B9 411 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 ARHGEF16Q5VV41 709 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 CCDC62Q6P9F0 684 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 SEPT14Q6ZU15 432 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 PIBF1Q8WXW3 757 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.59■□□□□ 0.25
RAB28-205ENST00000508274 MAF1Q9H063 256 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 PXMP2Q9NR77 195 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 POLR3EQ9NVU0 708 aa16.59■□□□□ 0.25
RAB28-205ENST00000508274 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.25
RAB28-205ENST00000508274 UNC80Q8N2C7 3258 aa16.58■□□□□ 0.24
RAB28-205ENST00000508274 PRC1O43663 620 aa16.58■□□□□ 0.24
RAB28-205ENST00000508274 HOXA13P31271 388 aaPredicted RBP16.58■□□□□ 0.24
RAB28-205ENST00000508274 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
RAB28-205ENST00000508274 LY6KQ17RY6 165 aa16.58■□□□□ 0.24
RAB28-205ENST00000508274 CREB3L3Q68CJ9 461 aa16.58■□□□□ 0.24
RAB28-205ENST00000508274 C16orf59Q7L2K0 433 aa16.58■□□□□ 0.24
RAB28-205ENST00000508274 CATIPQ7Z7H3 387 aa16.58■□□□□ 0.24
RAB28-205ENST00000508274 ZNF654Q8IZM8 581 aa16.58■□□□□ 0.24
RAB28-205ENST00000508274 A0A0C4DFX4 3053 aa16.57■□□□□ 0.24
RAB28-205ENST00000508274 PRUNE2Q8WUY3 3088 aa16.57■□□□□ 0.24
RAB28-205ENST00000508274 ACRP10323 421 aa16.57■□□□□ 0.24
RAB28-205ENST00000508274 GHRHRQ02643 423 aa16.57■□□□□ 0.24
RAB28-205ENST00000508274 STXBP2Q15833 593 aa16.57■□□□□ 0.24
RAB28-205ENST00000508274 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
RAB28-205ENST00000508274 ALDH8A1Q9H2A2 487 aaPredicted RBP16.57■□□□□ 0.24
RAB28-205ENST00000508274 HIPK3Q9H422 1215 aa16.57■□□□□ 0.24
RAB28-205ENST00000508274 TRMT13Q9NUP7 481 aaKnown RBP16.57■□□□□ 0.24
RAB28-205ENST00000508274 A6NJR5 290 aa16.56■□□□□ 0.24
RAB28-205ENST00000508274 NR3C2P08235 984 aa16.56■□□□□ 0.24
RAB28-205ENST00000508274 PPIGQ13427 754 aaKnown RBP eCLIP16.56■□□□□ 0.245e-9■■■□□ 16.3
RAB28-205ENST00000508274 FAM109BQ6ICB4 259 aaPredicted RBP16.56■□□□□ 0.24
RAB28-205ENST00000508274 CASC1Q6TDU7 716 aa16.56■□□□□ 0.24
RAB28-205ENST00000508274 TMEM199Q8N511 208 aa16.56■□□□□ 0.24
RAB28-205ENST00000508274 IL31RAQ8NI17 732 aa16.56■□□□□ 0.24
RAB28-205ENST00000508274 GUCD1Q96NT3 240 aa16.56■□□□□ 0.24
RAB28-205ENST00000508274 MTG1Q9BT17 334 aaPredicted RBP16.56■□□□□ 0.24
RAB28-205ENST00000508274 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
RAB28-205ENST00000508274 SCN5AQ14524 2016 aa16.56■□□□□ 0.24
RAB28-205ENST00000508274 SH2B2O14492 632 aaPredicted RBP16.55■□□□□ 0.24
RAB28-205ENST00000508274 RXRAP19793 462 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 MCM5P33992 734 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 CCL23P55773 120 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 SMAD3P84022 425 aaKnown RBP16.55■□□□□ 0.24
RAB28-205ENST00000508274 ARHGAP1Q07960 439 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 BRDTQ58F21 947 aaPredicted RBP16.55■□□□□ 0.24
RAB28-205ENST00000508274 TMEM240Q5SV17 173 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 ZNF697Q5TEC3 545 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 RAB11FIP4Q86YS3 637 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 AFG1LQ8WV93 481 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 PDCD2LQ9BRP1 358 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 NOC4LQ9BVI4 516 aaKnown RBP16.55■□□□□ 0.24
RAB28-205ENST00000508274 WNT8AQ9H1J5 351 aa16.55■□□□□ 0.24
RAB28-205ENST00000508274 PNMA6FA0A0J9YX94 578 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms