RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	COPS5	Q92905	334 aa		15.99	■□□□□ 0.15
CDHR2-204	ENST00000508085	TMEM87B	Q96K49	555 aa		15.99	■□□□□ 0.15
CDHR2-204	ENST00000508085	RMDN3	Q96TC7	470 aa		15.99	■□□□□ 0.15
CDHR2-204	ENST00000508085	MAP3K14	Q99558	947 aa		15.99	■□□□□ 0.15
CDHR2-204	ENST00000508085	LRRC2	Q9BYS8	371 aa		15.99	■□□□□ 0.15
CDHR2-204	ENST00000508085	TBX21	Q9UL17	535 aa		15.99	■□□□□ 0.15
CDHR2-204	ENST00000508085	PCDHA1	Q9Y5I3	950 aa		15.99	■□□□□ 0.15
CDHR2-204	ENST00000508085	SCN5A	Q14524	2016 aa		15.99	■□□□□ 0.15
CDHR2-204	ENST00000508085	TRIP12	Q14669	1992 aa	Predicted RBP	15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	DCDC2C	A8MYV0	355 aa		15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	FAM126B	Q8IXS8	530 aa		15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	RASEF	Q8IZ41	740 aa		15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	SCFD2	Q8WU76	684 aa		15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	GBF1	Q92538	1859 aa		15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	VTI1A	Q96AJ9	217 aa		15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	MPHOSPH6	Q99547	160 aa	Known RBP	15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	TANC1	Q9C0D5	1861 aa		15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	TMEM39A	Q9NV64	488 aa		15.98	■□□□□ 0.15
CDHR2-204	ENST00000508085	MROH7	Q68CQ1	1323 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	PNMA6F	A0A0J9YX94	578 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	CABYR	O75952	493 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	PLEKHA8P1	O95397	391 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	EIF2AK2	P19525	551 aa	Known RBP	15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	RXRA	P19793	462 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	LIFR	P42702	1097 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	PSMC6	P62333	389 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	PPP2R5B	Q15173	497 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	C9orf50	Q5SZB4	431 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	CCDC62	Q6P9F0	684 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	RAB11FIP4	Q86YS3	637 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	OR6J1	Q8NGC5	347 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	PIBF1	Q8WXW3	757 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	IWS1	Q96ST2	819 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	SPZ1	Q9BXG8	430 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	PXMP2	Q9NR77	195 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085	COL6A3	P12111	3177 aa		15.97	■□□□□ 0.15
CDHR2-204	ENST00000508085		B4DLN1	442 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	NKRF	O15226	690 aa	Known RBP eCLIP	15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	ZEB2	O60315	1214 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	CD4	P01730	458 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	RAG1	P15918	1043 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	HOXA13	P31271	388 aa	Predicted RBP	15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	MRPL12	P52815	198 aa	Known RBP	15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	EPHB4	P54760	987 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	PURA	Q00577	322 aa	Known RBP	15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	ITGA7	Q13683	1181 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	SHH	Q15465	462 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	ADCK5	Q3MIX3	580 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	ARHGEF16	Q5VV41	709 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	IL31RA	Q8NI17	732 aa		15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	CTCFL	Q8NI51	663 aa	Predicted RBP	15.96	■□□□□ 0.15
CDHR2-204	ENST00000508085	CCDC69	A6NI79	296 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	NR3C2	P08235	984 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	TXN	P10599	105 aa	Known RBP	15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	CPT1A	P50416	773 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	EXOSC10	Q01780	885 aa	Known RBP	15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	TTLL4	Q14679	1199 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	TSGA10IP	Q3SY00	556 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	RNF20	Q5VTR2	975 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	NFXL1	Q6ZNB6	911 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	SEPT14	Q6ZU15	432 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	SGMS1	Q86VZ5	419 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	TMTC2	Q8N394	836 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	SRBD1	Q8N5C6	995 aa	Known RBP	15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	TCEANC2	Q96MN5	208 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	PDCD2L	Q9BRP1	358 aa		15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085	MAP3K20	Q9NYL2	800 aa	Known RBP	15.95	■□□□□ 0.14
CDHR2-204	ENST00000508085		A6NJR5	290 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	RGS20	O76081	388 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	TIMP1	P01033	207 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	MYL3	P08590	195 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	SMARCA1	P28370	1054 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	KIF5B	P33176	963 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	ARHGAP1	Q07960	439 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	STXBP2	Q15833	593 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	LY6K	Q17RY6	165 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	CMTR1	Q8N1G2	835 aa	Known RBP	15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	SAMD3	Q8N6K7	520 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	NEK1	Q96PY6	1258 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	POLR3E	Q9NVU0	708 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	FRMPD4	Q14CM0	1322 aa		15.94	■□□□□ 0.14
CDHR2-204	ENST00000508085	GCOM1	H8Y6P7	765 aa	Predicted RBP	15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	EIF3J	O75822	258 aa	Known RBP	15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	POLR2M	P0CAP2	368 aa		15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	FPGS	Q05932	587 aa		15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	TRAF1	Q13077	416 aa		15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	PGM5	Q15124	567 aa		15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	KCNB2	Q92953	911 aa		15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	RRP36	Q96EU6	259 aa	Known RBP	15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	LZTS2	Q9BRK4	669 aa		15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	SLC12A7	Q9Y666	1083 aa		15.93	■□□□□ 0.14
CDHR2-204	ENST00000508085	TET1	Q8NFU7	2136 aa		15.92	■□□□□ 0.14
CDHR2-204	ENST00000508085	TLR3	O15455	904 aa	Known RBP	15.92	■□□□□ 0.14
CDHR2-204	ENST00000508085	B4GALT4	O60513	344 aa		15.92	■□□□□ 0.14
CDHR2-204	ENST00000508085	NEFL	P07196	543 aa		15.92	■□□□□ 0.14
CDHR2-204	ENST00000508085	CALM1	P0DP23	149 aa		15.92	■□□□□ 0.14
CDHR2-204	ENST00000508085	CALM2	P0DP24	149 aa		15.92	■□□□□ 0.14
CDHR2-204	ENST00000508085	CALM3	P0DP25	149 aa		15.92	■□□□□ 0.14
CDHR2-204	ENST00000508085	MFSD5	Q6N075	450 aa		15.92	■□□□□ 0.14
CDHR2-204	ENST00000508085	GPR153	Q6NV75	609 aa		15.92	■□□□□ 0.14

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms