RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TRIM21P19474 475 aaKnown RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 GUCY2CP25092 1073 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 TNFRSF8P28908 595 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 GUCY1A2P33402 732 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 PHKA1P46020 1223 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 GNAQP50148 359 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 VAV2P52735 878 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 NLRP5P59047 1200 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 AMPD3Q01432 767 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 SEC23AQ15436 765 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 PTPN21Q16825 1174 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 CCDC181Q5TID7 509 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 NCAPH2Q6IBW4 605 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 PDXDC2PQ6P474 469 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 PI16Q6UXB8 463 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 TRIM67Q6ZTA4 783 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 ADSSL1Q8N142 457 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 NOA1Q8NC60 698 aaKnown RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 RASSF8Q8NHQ8 419 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 PRR7Q8TB68 274 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 EPSTI1Q96J88 318 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 TRIM47Q96LD4 638 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 CEP89Q96ST8 783 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 NUDT12Q9BQG2 462 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 SELENOOQ9BVL4 669 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 BRIP1Q9BX63 1249 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 NUCKS1Q9H1E3 243 aaKnown RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 GREM2Q9H772 168 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 GEMIN8Q9NWZ8 242 aaKnown RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 VPS54Q9P1Q0 977 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 LRP2BPQ9P2M1 347 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 TRMT112Q9UI30 125 aaKnown RBP5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 LCMT1Q9UIC8 334 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 HYOU1Q9Y4L1 999 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 ARAP2Q8WZ64 1704 aa5.53□□□□□ -1.52
HMGB3P16-201ENST00000508037 AKAP11Q9UKA4 1901 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ABCB11O95342 1321 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 XDHP47989 1333 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 MYO5AQ9Y4I1 1855 aaKnown RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 A0A087X0B3 334 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 MAGEB6P1A0A0J9YX57 407 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 TTC26A0AVF1 554 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 TNFRSF10AO00220 468 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 PES1O00541 588 aaKnown RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 EIF3HO15372 352 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ORC4O43929 436 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZEB2O60315 1214 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 GDF9O60383 454 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 PHACTR2O75167 634 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 RHOBTB3O94955 611 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ATP1A1P05023 1023 aaKnown RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 SCG2P13521 617 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 IDEP14735 1019 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 CYP7A1P22680 504 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 HNRNPH3P31942 346 aaKnown RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 INPP5BP32019 993 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 IGHMBP2P38935 993 aaKnown RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 PRPHP41219 470 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 UBA7P41226 1012 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 PRCPP42785 496 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 IRAK1P51617 712 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 SKOR1P84550 965 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 TRIM32Q13049 653 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ORC2Q13416 577 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 RASGRF1Q13972 1273 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZNF174Q15697 407 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 PKN1Q16512 942 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 COBLL1Q53SF7 1204 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 PRPF38BQ5VTL8 546 aaKnown RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 MCTP2Q6DN12 878 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 TRAF7Q6Q0C0 670 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 DTHD1Q6ZMT9 781 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 TOM1L2Q6ZVM7 507 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 TMTC3Q6ZXV5 915 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 USP49Q70CQ1 688 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCDC84Q86UT8 332 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 IFT20Q8IY31 132 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 MICALL1Q8N3F8 863 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ARFGAP2Q8N6H7 521 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 GIMAP8Q8ND71 665 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 C1orf131Q8NDD1 294 aaKnown RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZNF507Q8TCN5 953 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 AENQ8WTP8 325 aaKnown RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 TNFRSF25Q93038 417 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 CAVIN3Q969G5 261 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 CCDC42Q96M95 316 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 AK8Q96MA6 479 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 PCMTD1Q96MG8 357 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 PURBQ96QR8 312 aaKnown RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ERGIC2Q96RQ1 377 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 MMS19Q96T76 1030 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 MYCBPQ99417 103 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 CARD10Q9BWT7 1032 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 EDEM3Q9BZQ6 932 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 LRRC27Q9C0I9 530 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 JADE2Q9NQC1 790 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 DISC1Q9NRI5 854 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 GGA2Q9UJY4 613 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 SNX12Q9UMY4 172 aa5.52□□□□□ -1.53
HMGB3P16-201ENST00000508037 ZNF330Q9Y3S2 320 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms