RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 USP17L20D6RJB6 530 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 RIOK3O14730 519 aaKnown RBP19.81■□□□□ 0.76
SFXN1-208ENST00000507823 PSMA7O14818 248 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 FECHP22830 423 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 USP17L24Q0WX57 530 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 USP17L6PQ6QN14 398 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 SV2BQ7L1I2 683 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 NUP88Q99567 741 aaPredicted RBP19.81■□□□□ 0.76
SFXN1-208ENST00000507823 ARHGEF10LQ9HCE6 1279 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 PLA2G6O60733 806 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 FOSP01100 380 aaPredicted RBP19.81■□□□□ 0.76
SFXN1-208ENST00000507823 KRT79Q5XKE5 535 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 RAD54LQ92698 747 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 PIM2Q9P1W9 311 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 ZBTB21Q9ULJ3 1066 aa19.81■□□□□ 0.76
SFXN1-208ENST00000507823 ZBTB12Q9Y330 459 aaPredicted RBP19.81■□□□□ 0.76
SFXN1-208ENST00000507823 CTIFO43310 598 aaKnown RBP19.8■□□□□ 0.76
SFXN1-208ENST00000507823 COPB1P53618 953 aaKnown RBP19.8■□□□□ 0.76
SFXN1-208ENST00000507823 PTPN21Q16825 1174 aa19.8■□□□□ 0.76
SFXN1-208ENST00000507823 LARP4BQ92615 738 aaKnown RBP19.8■□□□□ 0.76
SFXN1-208ENST00000507823 P2RX7Q99572 595 aaKnown RBP19.8■□□□□ 0.76
SFXN1-208ENST00000507823 TRMT1Q9NXH9 659 aaKnown RBP19.8■□□□□ 0.76
SFXN1-208ENST00000507823 POTEMA6NI47 508 aa19.8■□□□□ 0.76
SFXN1-208ENST00000507823 KCNJ18B7U540 433 aa19.8■□□□□ 0.76
SFXN1-208ENST00000507823 PIK3CDO00329 1044 aa19.8■□□□□ 0.76
SFXN1-208ENST00000507823 EEF1GP26641 437 aaKnown RBP19.8■□□□□ 0.76
SFXN1-208ENST00000507823 KCNJ12Q14500 433 aa19.8■□□□□ 0.76
SFXN1-208ENST00000507823 BAG1Q99933 345 aaPredicted RBP19.8■□□□□ 0.76
SFXN1-208ENST00000507823 LRRC27Q9C0I9 530 aa19.8■□□□□ 0.76
SFXN1-208ENST00000507823 EXOC1Q9NV70 894 aa19.8■□□□□ 0.76
SFXN1-208ENST00000507823 OPLAHO14841 1288 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 TBX3O15119 743 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 PMS1P54277 932 aaKnown RBP19.79■□□□□ 0.76
SFXN1-208ENST00000507823 CXCL9Q07325 125 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 TRAF1Q13077 416 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 UNC13DQ70J99 1090 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 SNX29Q8TEQ0 813 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 NUDT12Q9BQG2 462 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 PRR12Q9ULL5 1215 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 MYMKA6NI61 221 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 CCNE1P24864 410 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 CIITAP33076 1130 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 SREBF1P36956 1147 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 ASIC1P78348 528 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 EHHADHQ08426 723 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 PDE4DQ08499 809 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 Q4G0T1 1027 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 FOXR2Q6PJQ5 311 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 ANKRD20A12PQ8NF67 263 aa19.79■□□□□ 0.76
SFXN1-208ENST00000507823 DUSP9Q99956 384 aaKnown RBP19.79■□□□□ 0.76
SFXN1-208ENST00000507823 AKR1B15C9JRZ8 316 aaPredicted RBP19.78■□□□□ 0.76
SFXN1-208ENST00000507823 GOLGA8FQ08AF8 430 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 GOLGA8DPQ0D2H9 430 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 CCDC51Q96ER9 411 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 GOPCQ9HD26 462 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 PCDHA12Q9UN75 941 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 KDM3AQ9Y4C1 1321 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 RAD21O60216 631 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 STK4Q13043 487 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 KIAA1755Q5JYT7 1200 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 P2RX5Q93086 422 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 NAA15Q9BXJ9 866 aaKnown RBP19.78■□□□□ 0.76
SFXN1-208ENST00000507823 MAPK8IP1Q9UQF2 711 aa19.78■□□□□ 0.76
SFXN1-208ENST00000507823 BICDL2A1A5D9 508 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 TRIM49BA6NDI0 452 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 ECE1P42892 770 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 ARHGAP4P98171 946 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 MCM6Q14566 821 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 REXO1L1PQ8IX06 675 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 SLFN12Q8IYM2 578 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 ETNPPLQ8TBG4 499 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 ACER1Q8TDN7 264 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 CDK5RAP3Q96JB5 506 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 CYP3A4P08684 503 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 STAT2P52630 851 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 KIAA0895Q8NCT3 520 aa19.77■□□□□ 0.76
SFXN1-208ENST00000507823 MFAP3LO75121 409 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 COBLO75128 1261 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 ADKP55263 362 aaKnown RBP19.76■□□□□ 0.75
SFXN1-208ENST00000507823 TRIM14Q14142 442 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 ECM1Q16610 540 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 KCNK18Q7Z418 384 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 LENG9Q96B70 501 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 NT5C3AQ9H0P0 336 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.76■□□□□ 0.756e-7■■□□□ 11.5
SFXN1-208ENST00000507823 N4BP3O15049 544 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 CAP2P40123 477 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 ZNF280AP59817 542 aaPredicted RBP19.76■□□□□ 0.75
SFXN1-208ENST00000507823 RBL2Q08999 1139 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 CENPPQ6IPU0 288 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 RANBP17Q9H2T7 1088 aaKnown RBP19.76■□□□□ 0.75
SFXN1-208ENST00000507823 VCPKMTQ9H867 229 aa19.76■□□□□ 0.75
SFXN1-208ENST00000507823 A0A1W2PQC6 194 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 WNT10BO00744 389 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 ZSCAN12O43309 604 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 GYPCP04921 128 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 SPIRE1Q08AE8 756 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 PSMD2Q13200 908 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 DALRD3Q5D0E6 543 aaKnown RBP19.75■□□□□ 0.75
SFXN1-208ENST00000507823 CIAPIN1Q6FI81 312 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms