RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 YME1L1Q96TA2 773 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 INCENPQ9NQS7 918 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 HDAC5Q9UQL6 1122 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 COL11A1P12107 1806 aaPredicted RBP8.72□□□□□ -1.01
VCAN-207ENST00000507162 PTPRCP08575 1304 aa8.72□□□□□ -1.01
VCAN-207ENST00000507162 KMT2EQ8IZD2 1858 aa8.71□□□□□ -1.01
VCAN-207ENST00000507162 SRGAP3O43295 1099 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 EFCAB14O75071 495 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 TBX10O75333 385 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 AMHP03971 560 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 CPT1AP50416 773 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 RRP1P56182 461 aaKnown RBP8.71□□□□□ -1.02
VCAN-207ENST00000507162 G3BP1Q13283 466 aaKnown RBP eCLIP8.71□□□□□ -1.02
VCAN-207ENST00000507162 ADAM15Q13444 863 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 CBX2Q14781 532 aaPredicted RBP8.71□□□□□ -1.02
VCAN-207ENST00000507162 TMEM105Q8N8V8 129 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 FAM133AQ8N9E0 248 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 CAGE1Q8TC20 777 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 CHAMP1Q96JM3 812 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 HINFPQ9BQA5 517 aa8.71□□□□□ -1.02
VCAN-207ENST00000507162 ZFHX4Q86UP3 3567 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 FAM208BQ5VWN6 2430 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 MAGEB6P1A0A0J9YX57 407 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 CTNNB1P35222 781 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 HTRA4P83105 476 aaPredicted RBP8.7□□□□□ -1.02
VCAN-207ENST00000507162 DUSP28Q4G0W2 176 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 FBXO11Q86XK2 927 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 OR6J1Q8NGC5 347 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 CCDC17Q96LX7 622 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 DBNDD2Q9BQY9 259 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 WDR11Q9BZH6 1224 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 CRNKL1Q9BZJ0 848 aaKnown RBP8.7□□□□□ -1.02
VCAN-207ENST00000507162 KANSL2Q9H9L4 492 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 SWAP70Q9UH65 585 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 SIP14410 1827 aa8.7□□□□□ -1.02
VCAN-207ENST00000507162 DNAH14Q0VDD8 3507 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 ATP2A1O14983 1001 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 GRM6O15303 877 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 PARNO95453 639 aaKnown RBP8.69□□□□□ -1.02
VCAN-207ENST00000507162 EYA4O95677 639 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 CXCL10P02778 98 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 CKBP12277 381 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 ICAM3P32942 547 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 CDK8P49336 464 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 PTPN11Q06124 597 aaPredicted RBP8.69□□□□□ -1.02
VCAN-207ENST00000507162 PTPN21Q16825 1174 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 GDF6Q6KF10 455 aaPredicted RBP8.69□□□□□ -1.02
VCAN-207ENST00000507162 MSLNLQ96KJ4 702 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
VCAN-207ENST00000507162 PHF7Q9BWX1 381 aaPredicted RBP8.69□□□□□ -1.02
VCAN-207ENST00000507162 ACAD9Q9H845 621 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 A1CFQ9NQ94 594 aaKnown RBP8.69□□□□□ -1.02
VCAN-207ENST00000507162 ISY1Q9ULR0 285 aaKnown RBP8.69□□□□□ -1.02
VCAN-207ENST00000507162 USP15Q9Y4E8 981 aaPredicted RBP8.69□□□□□ -1.02
VCAN-207ENST00000507162 PCDHGC5Q9Y5F6 944 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 USP24Q9UPU5 2620 aa8.69□□□□□ -1.02
VCAN-207ENST00000507162 PTPRSQ13332 1948 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 F5H6K3 240 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 KPNA6O60684 536 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 IGSF3O75054 1194 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 SP100P23497 879 aaPredicted RBP8.68□□□□□ -1.02
VCAN-207ENST00000507162 KLRC3Q07444 240 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 RSPO4Q2I0M5 234 aaPredicted RBP8.68□□□□□ -1.02
VCAN-207ENST00000507162 ASTLQ6HA08 431 aaPredicted RBP8.68□□□□□ -1.02
VCAN-207ENST00000507162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.68□□□□□ -1.02
VCAN-207ENST00000507162 DBF4BQ8NFT6 615 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 SDR42E1Q8WUS8 393 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 DHX38Q92620 1227 aaKnown RBP8.68□□□□□ -1.02
VCAN-207ENST00000507162 MFSD1Q9H3U5 465 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 PRKRIP1Q9H875 184 aaPredicted RBP8.68□□□□□ -1.02
VCAN-207ENST00000507162 SLC38A10Q9HBR0 1119 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 VTA1Q9NP79 307 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 RNF146Q9NTX7 359 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 CLEC1BQ9P126 229 aa8.68□□□□□ -1.02
VCAN-207ENST00000507162 SETXQ7Z333 2677 aaKnown RBP8.67□□□□□ -1.02
VCAN-207ENST00000507162 CYP2D7A0A087X1C5 515 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 LGR5O75473 907 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 LMNAP02545 664 aaKnown RBP8.67□□□□□ -1.02
VCAN-207ENST00000507162 ALAS1P13196 640 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 BMPR1AP36894 532 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 ACAP1Q15027 740 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 ZNF618Q5T7W0 954 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 FOCADQ5VW36 1801 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 GPR179Q6PRD1 2367 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 RBM23Q86U06 439 aaKnown RBP8.67□□□□□ -1.02
VCAN-207ENST00000507162 FIBCD1Q8N539 461 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 SMRP1Q8NCR6 262 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 KREMEN2Q8NCW0 462 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 SSH1Q8WYL5 1049 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 RAD50Q92878 1312 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 COPS5Q92905 334 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 TRERF1Q96PN7 1200 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 RIOK1Q9BRS2 568 aaKnown RBP8.67□□□□□ -1.02
VCAN-207ENST00000507162 C11orf84Q9BUA3 381 aaPredicted RBP8.67□□□□□ -1.02
VCAN-207ENST00000507162 LMAN2LQ9H0V9 348 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 ANTXR1Q9H6X2 564 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 DCP1AQ9NPI6 582 aaPredicted RBP8.67□□□□□ -1.02
VCAN-207ENST00000507162 DLL3Q9NYJ7 618 aa8.67□□□□□ -1.02
VCAN-207ENST00000507162 BARX2Q9UMQ3 279 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms