RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 NALCNQ8IZF0 1738 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 LRRC53A6NM62 1247 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 RPS6KA4O75676 772 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 PDCLQ13371 301 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 TRADDQ15628 312 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 KIAA0753Q2KHM9 967 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 OR2W6PQ8NHA6 318 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 KIFC2Q96AC6 838 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 DNAJC17Q9NVM6 304 aaKnown RBP10.64□□□□□ -0.71
PHF3-208ENST00000506783 NFU1Q9UMS0 254 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 PCDHA4Q9UN74 947 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 CAPN6Q9Y6Q1 641 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 CHD2O14647 1828 aaKnown RBP10.64□□□□□ -0.71
PHF3-208ENST00000506783 MYO1CO00159 1063 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 KCNK3O14649 394 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 NTSR2O95665 410 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 AMIGO3Q86WK7 504 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 TAB3Q8N5C8 712 aaPredicted RBP10.64□□□□□ -0.71
PHF3-208ENST00000506783 BCAS4Q8TDM0 211 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 AFAP1L1Q8TED9 768 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.64□□□□□ -0.71
PHF3-208ENST00000506783 TAF4BQ92750 862 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 CCDC43Q96MW1 224 aaKnown RBP10.64□□□□□ -0.71
PHF3-208ENST00000506783 LTN1O94822 1766 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 ABCC12Q96J65 1359 aa10.64□□□□□ -0.71
PHF3-208ENST00000506783 LRRN2O75325 713 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 CDK8P49336 464 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 KRT83P78385 493 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 ATP2C1P98194 919 aaPredicted RBP10.63□□□□□ -0.71
PHF3-208ENST00000506783 C8orf74Q6P047 294 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 EPB41L5Q9HCM4 733 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 PCDHA6Q9UN73 950 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 PCDHA8Q9Y5H6 950 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 CNTNAP5Q8WYK1 1306 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 PDE2AO00408 941 aaPredicted RBP10.63□□□□□ -0.71
PHF3-208ENST00000506783 CFBP00751 764 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 CYP2C19P33261 490 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 VPS41P49754 854 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 PFKFB3Q16875 520 aaPredicted RBP10.63□□□□□ -0.71
PHF3-208ENST00000506783 CT47A1Q5JQC4 288 aaPredicted RBP10.63□□□□□ -0.71
PHF3-208ENST00000506783 CCDC174Q6PII3 467 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 BARGINQ6ZT62 677 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 NEK8Q86SG6 692 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 P2RX5Q93086 422 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 RRP15Q9Y3B9 282 aaKnown RBP10.63□□□□□ -0.71
PHF3-208ENST00000506783 RIC1Q4ADV7 1423 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 POTEB3A0JP26 581 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 CCDC151A5D8V7 595 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 POTECB2RU33 542 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 PRPF6O94906 941 aaKnown RBP10.63□□□□□ -0.71
PHF3-208ENST00000506783 SLC1A4P43007 532 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 GNGT1P63211 74 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 POTEBQ6S5H4 581 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 UBLCP1Q8WVY7 318 aaPredicted RBP10.63□□□□□ -0.71
PHF3-208ENST00000506783 DDX12PQ92771 950 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 PCDHA12Q9UN75 941 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 FAM208AQ9UK61 1670 aaKnown RBP10.63□□□□□ -0.71
PHF3-208ENST00000506783 OVOS2A0A0G2JMS6 1433 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 AKAP12Q02952 1782 aa10.63□□□□□ -0.71
PHF3-208ENST00000506783 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 H7C1D1 291 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 SLC37A4O43826 429 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 SSTR3P32745 418 aaPredicted RBP10.62□□□□□ -0.71
PHF3-208ENST00000506783 MNAT1P51948 309 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 GJB7Q6PEY0 223 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 CPXCR1Q8N123 301 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 CYP2J2P51589 502 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 DHX9Q08211 1270 aaKnown RBP10.62□□□□□ -0.71
PHF3-208ENST00000506783 UBE4AQ14139 1066 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 TPH2Q8IWU9 490 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 ALS2CR12Q96Q35 445 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 PANX2Q96RD6 677 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 TSG101Q99816 390 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 RASSF4Q9H2L5 321 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 USP40Q9NVE5 1235 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 RWDD2AQ9UIY3 292 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 CEP350Q5VT06 3117 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 POTEFA5A3E0 1075 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 NDUFAB1O14561 156 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 POTEIP0CG38 1075 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 KIF11P52732 1056 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 AMPD3Q01432 767 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 KLHL30Q0D2K2 578 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 POTEGQ6S5H5 508 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 POTEEQ6S8J3 1075 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 GPBP1Q86WP2 473 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 CTNNBL1Q8WYA6 563 aaPredicted RBP10.62□□□□□ -0.71
PHF3-208ENST00000506783 PACSIN1Q9BY11 444 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 KCNQ5Q9NR82 932 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.62□□□□□ -0.71
PHF3-208ENST00000506783 TCEAL9Q9UHQ7 104 aa10.62□□□□□ -0.71
PHF3-208ENST00000506783 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.62□□□□□ -0.71
PHF3-208ENST00000506783 MYMKA6NI61 221 aa10.61□□□□□ -0.71
PHF3-208ENST00000506783 KRT13P13646 458 aa10.61□□□□□ -0.71
PHF3-208ENST00000506783 AKR1B1P15121 316 aa10.61□□□□□ -0.71
PHF3-208ENST00000506783 GNA11P29992 359 aa10.61□□□□□ -0.71
PHF3-208ENST00000506783 IFFO1Q0D2I5 559 aa10.61□□□□□ -0.71
PHF3-208ENST00000506783 BEND6Q5SZJ8 279 aaPredicted RBP10.61□□□□□ -0.71
PHF3-208ENST00000506783 FAM182AQ5T1J6 154 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms