RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 SF3B6Q9Y3B4 125 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-205ENST00000506779 SRGAP3O43295 1099 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 TP53P04637 393 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 CD3EP07766 207 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 ACRP10323 421 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 ITGA4P13612 1032 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 ITGB6P18564 788 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 CEBPAP49715 358 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 INTS3Q68E01 1043 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 IGFL4Q6B9Z1 124 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 CABP7Q86V35 215 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 PPFIBP1Q86W92 1011 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 FIBCD1Q8N539 461 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 TMEM87AQ8NBN3 555 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 ADAMTS17Q8TE56 1095 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 BRF1Q92994 677 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 RNF34Q969K3 372 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 ZDHHC15Q96MV8 337 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 TM9SF2Q99805 663 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 TRIM8Q9BZR9 551 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 NOL6Q9H6R4 1146 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 GP6Q9HCN6 339 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 PLA2G2DQ9UNK4 145 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 FHOD1Q9Y613 1164 aa4.48□□□□□ -1.69
TOPBP1-205ENST00000506779 A0A087X1B8 175 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 F8W031 263 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 FGF10O15520 208 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 TBC1D8O95759 1140 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 ZNF76P36508 570 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 CORO7P57737 925 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 ZNF445P59923 1031 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 POU4F1Q01851 419 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 KIAA2012Q0VF49 1180 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 AXDND1Q5T1B0 1012 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 TAB3Q8N5C8 712 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 DNERQ8NFT8 737 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 PTCHD1Q96NR3 888 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 PPP4R1LQ9P1A2 415 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 ZFR2Q9UPR6 939 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 HCFC2Q9Y5Z7 792 aa4.47□□□□□ -1.69
TOPBP1-205ENST00000506779 IFNGR1P15260 489 aa4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 CD247P20963 164 aa4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 GUCY2CP25092 1073 aa4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 L1CAMP32004 1257 aa4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 PPP2R5DQ14738 602 aa4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 TCEAL1Q15170 157 aa4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 ALG3Q92685 438 aa4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 MRRFQ96E11 262 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 SRRTQ9BXP5 876 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 RNF38Q9H0F5 515 aa4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 SPATA6Q9NWH7 488 aaPredicted RBP4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 TESMINQ9Y4I5 508 aa4.46□□□□□ -1.7
TOPBP1-205ENST00000506779 SELENOPP49908 381 aa4.45□□□□□ -1.7
TOPBP1-205ENST00000506779 PRR5P85299 388 aa4.45□□□□□ -1.7
TOPBP1-205ENST00000506779 FOXE3Q13461 319 aa4.45□□□□□ -1.7
TOPBP1-205ENST00000506779 ZYXQ15942 572 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-205ENST00000506779 RGL3Q3MIN7 710 aa4.45□□□□□ -1.7
TOPBP1-205ENST00000506779 ANKRD39Q53RE8 183 aa4.45□□□□□ -1.7
TOPBP1-205ENST00000506779 FCRL3Q96P31 734 aaPredicted RBP4.45□□□□□ -1.7
TOPBP1-205ENST00000506779 PPT2Q9UMR5 302 aa4.45□□□□□ -1.7
TOPBP1-205ENST00000506779 ZNF451Q9Y4E5 1061 aa4.45□□□□□ -1.7
TOPBP1-205ENST00000506779 MUSKO15146 869 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 ZNF202O95125 648 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 ERBB2P04626 1255 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 NCAM1P13591 858 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 MC3RP41968 323 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 INHBCP55103 352 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 BORAQ6PGQ7 559 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 UNC5AQ6ZN44 842 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 ADCY4Q8NFM4 1077 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 WWC2-AS2Q96NR7 200 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 GBP3Q9H0R5 595 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 RXFP1Q9HBX9 757 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 NUDT5Q9UKK9 219 aa4.44□□□□□ -1.7
TOPBP1-205ENST00000506779 STXBP3O00186 592 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 ASGR2P07307 311 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 FANCCQ00597 558 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 ZNF394Q53GI3 561 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 MIIPQ5JXC2 388 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 EEF1DP3Q658K8 133 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 RCSD1Q6JBY9 416 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 RUFY4Q6ZNE9 571 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 TTLL7Q6ZT98 887 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 B3GNT8Q7Z7M8 397 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 LZTR1Q8N653 840 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 CRBNQ96SW2 442 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 SEMA4AQ9H3S1 761 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 IGSF5Q9NSI5 407 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 WHRNQ9P202 907 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 ZNF214Q9UL59 606 aaPredicted RBP4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 RWDD3Q9Y3V2 267 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 TCAF1Q9Y4C2 921 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 PCDHGB7Q9Y5F8 929 aa4.43□□□□□ -1.7
TOPBP1-205ENST00000506779 GPR42O15529 346 aa4.42□□□□□ -1.7
TOPBP1-205ENST00000506779 LAMTOR5O43504 91 aa4.42□□□□□ -1.7
TOPBP1-205ENST00000506779 GLI4P10075 376 aa4.42□□□□□ -1.7
TOPBP1-205ENST00000506779 PMLP29590 882 aa4.42□□□□□ -1.7
TOPBP1-205ENST00000506779 RBM25P49756 843 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-205ENST00000506779 SEPHS1P49903 392 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms