RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 WDR11Q9BZH6 1224 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 AP5M1Q9H0R1 490 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 LY9Q9HBG7 655 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 VAT1LQ9HCJ6 419 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 GTF3C3Q9Y5Q9 886 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 BAZ2BQ9UIF8 2168 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 GRIN2DO15399 1336 aa10.56□□□□□ -0.72
PDLIM5-209ENST00000506632 B4DLN1 442 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 NKRFO15226 690 aaKnown RBP eCLIP10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 DHX16O60231 1041 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 ABCB7O75027 752 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 CD4P01730 458 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 MRPL12P52815 198 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 PDE4DQ08499 809 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 CREB3L3Q68CJ9 461 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 SAMD3Q8N6K7 520 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 NSUN6Q8TEA1 469 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 SCFD2Q8WU76 684 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 IWS1Q96ST2 819 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 MPHOSPH6Q99547 160 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 SEZ6LQ9BYH1 1024 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 GPHNQ9NQX3 736 aaPredicted RBP10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 TMEM39AQ9NV64 488 aa10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 MAP3K20Q9NYL2 800 aaKnown RBP10.55□□□□□ -0.72
PDLIM5-209ENST00000506632 SCN10AQ9Y5Y9 1956 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 SH2B2O14492 632 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 PRC1O43663 620 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 ZEB2O60315 1214 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 DDAH1O94760 285 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 ARIH2O95376 493 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 TIMP1P01033 207 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 RAG1P15918 1043 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 MCM5P33992 734 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 EPHB4P54760 987 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 PURAQ00577 322 aaKnown RBP10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 PPP2R5BQ15173 497 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 SHHQ15465 462 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 C9orf50Q5SZB4 431 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 CCDC62Q6P9F0 684 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 CATIPQ7Z7H3 387 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 ZNF654Q8IZM8 581 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 HS6ST3Q8IZP7 471 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 VTI1AQ96AJ9 217 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 TMEM87BQ96K49 555 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 PIGSQ96S52 555 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 RMDN3Q96TC7 470 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 SPZ1Q9BXG8 430 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 ANO2Q9NQ90 1003 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 PCDHA1Q9Y5I3 950 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 KIAA1217Q5T5P2 1943 aa10.54□□□□□ -0.72
PDLIM5-209ENST00000506632 PNMA6FA0A0J9YX94 578 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 A6NJR5 290 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 CFBP00751 764 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 TXNP10599 105 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 SMARCA1P28370 1054 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 LIFRP42702 1097 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 CPT1AP50416 773 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 FPGSQ05932 587 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 TRAF1Q13077 416 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 ITGA7Q13683 1181 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 TTLL4Q14679 1199 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 STXBP2Q15833 593 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 CASC1Q6TDU7 716 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 HOMER1Q86YM7 354 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 TMTC2Q8N394 836 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 OR6J1Q8NGC5 347 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 COPS5Q92905 334 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 MYL10Q9BUA6 226 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 PXMP2Q9NR77 195 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
PDLIM5-209ENST00000506632 TLR3O15455 904 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 CDC45O75419 566 aa10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 NR3C2P08235 984 aa10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 EIF2AK2P19525 551 aaKnown RBP10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 PSMC6P62333 389 aa10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 TSGA10IPQ3SY00 556 aa10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 FAM109BQ6ICB4 259 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 MFSD5Q6N075 450 aa10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 PDCD2LQ9BRP1 358 aa10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 FRMPD4Q14CM0 1322 aa10.52□□□□□ -0.73
PDLIM5-209ENST00000506632 B4GALT4O60513 344 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 KPNA6O60684 536 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 EIF3JO75822 258 aaKnown RBP10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 RGS20O76081 388 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 HOXA13P31271 388 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 KIF5BP33176 963 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 ARHGAP1Q07960 439 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 LY6KQ17RY6 165 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 RNF20Q5VTR2 975 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 ARHGEF16Q5VV41 709 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 SEPT14Q6ZU15 432 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 Q7L0L9 218 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 C16orf59Q7L2K0 433 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 VSIG10LQ86VR7 867 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 SGMS1Q86VZ5 419 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 DEFB123Q8N688 67 aa10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 CTCFLQ8NI51 663 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 EMID1Q96A84 441 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-209ENST00000506632 CCDC136Q96JN2 1154 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms