RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.19■□□□□ 0.02
TCOF1-209ENST00000506630 MRPL11Q9Y3B7 192 aaKnown RBP15.19■□□□□ 0.02
TCOF1-209ENST00000506630 MYH7BA7E2Y1 1941 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 ASB14A6NK59 587 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 DCDC2CA8MYV0 355 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 ZBTB43O43298 467 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 ADCY6O43306 1168 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 PPP1R11O60927 126 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-209ENST00000506630 SNAI1O95863 264 aaPredicted RBP15.18■□□□□ 0.02
TCOF1-209ENST00000506630 PGK1P00558 417 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 ITGB8P26012 769 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 EPHB4P54760 987 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 RPS6P62753 249 aaKnown RBP15.18■□□□□ 0.02
TCOF1-209ENST00000506630 CMTR1Q8N1G2 835 aaKnown RBP15.18■□□□□ 0.02
TCOF1-209ENST00000506630 SPZ1Q9BXG8 430 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 ADD3Q9UEY8 706 aaKnown RBP15.18■□□□□ 0.02
TCOF1-209ENST00000506630 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
TCOF1-209ENST00000506630 BRPF3Q9ULD4 1205 aa15.18■□□□□ 0.02
TCOF1-209ENST00000506630 ASTN1O14525 1302 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 A0A1W2PQ45 241 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-209ENST00000506630 A0A1W2PQY0 241 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 GOLGA8AA7E2F4 631 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 EIF5BO60841 1220 aaKnown RBP15.17■□□□□ 0.02
TCOF1-209ENST00000506630 AKR1A1P14550 325 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 PTGS1P23219 599 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 DNAJB2P25686 324 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 ALDH5A1P51649 535 aaPredicted RBP15.17■□□□□ 0.02
TCOF1-209ENST00000506630 APOBRQ0VD83 1088 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 GRIN2CQ14957 1233 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 RTN1Q16799 776 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 TMTC3Q6ZXV5 915 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 SRBD1Q8N5C6 995 aaKnown RBP15.17■□□□□ 0.02
TCOF1-209ENST00000506630 FANCBQ8NB91 859 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 BRF1Q92994 677 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 RRP36Q96EU6 259 aaKnown RBP15.17■□□□□ 0.02
TCOF1-209ENST00000506630 TOX2Q96NM4 488 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 RBM28Q9NW13 759 aaKnown RBP15.17■□□□□ 0.02
TCOF1-209ENST00000506630 PCDHA1Q9Y5I3 950 aa15.17■□□□□ 0.02
TCOF1-209ENST00000506630 CFBP00751 764 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 SMARCA1P28370 1054 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 TRAF1Q13077 416 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 ACVR2BQ13705 512 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 RUFY3Q7L099 469 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 EEPD1Q7L9B9 569 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 CCDC82Q8N4S0 544 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 TBC1D5Q92609 795 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 TSEN34Q9BSV6 310 aaKnown RBP15.16■□□□□ 0.02
TCOF1-209ENST00000506630 ABHD16BQ9H3Z7 469 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 ZNF576Q9H609 170 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 STARD7Q9NQZ5 370 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 CYP46A1Q9Y6A2 500 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 CNTNAP5Q8WYK1 1306 aa15.16■□□□□ 0.02
TCOF1-209ENST00000506630 MYADML2A6NDP7 307 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 TNFRSF10AO00220 468 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 METAP2P50579 478 aaKnown RBP eCLIP15.15■□□□□ 0.02
TCOF1-209ENST00000506630 FAAP100Q0VG06 881 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 TMEM63BQ5T3F8 832 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 ANKRD33Q7Z3H0 272 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 FBXO16Q8IX29 292 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-209ENST00000506630 RGS22Q8NE09 1264 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 TIFAQ96CG3 184 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 GAS2L1Q99501 681 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-209ENST00000506630 MPHOSPH6Q99547 160 aaKnown RBP15.15■□□□□ 0.02
TCOF1-209ENST00000506630 UPF3BQ9BZI7 483 aaKnown RBP15.15■□□□□ 0.02
TCOF1-209ENST00000506630 TM6SF1Q9BZW5 370 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 MAF1Q9H063 256 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 ZSWIM6Q9HCJ5 1215 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 FAM184BQ9ULE4 1060 aa15.15■□□□□ 0.02
TCOF1-209ENST00000506630 LAMA2P24043 3122 aaKnown RBP15.15■□□□□ 0.02
TCOF1-209ENST00000506630 COL9A1P20849 921 aa15.14■□□□□ 0.01
TCOF1-209ENST00000506630 ACLYP53396 1101 aa15.14■□□□□ 0.01
TCOF1-209ENST00000506630 RCAN1P53805 252 aa15.14■□□□□ 0.01
TCOF1-209ENST00000506630 CCDC144BQ3MJ40 725 aa15.14■□□□□ 0.01
TCOF1-209ENST00000506630 USP38Q8NB14 1042 aa15.14■□□□□ 0.01
TCOF1-209ENST00000506630 DNERQ8NFT8 737 aa15.14■□□□□ 0.01
TCOF1-209ENST00000506630 SYTL5Q8TDW5 730 aaPredicted RBP15.14■□□□□ 0.01
TCOF1-209ENST00000506630 KATNBL1Q9H079 304 aa15.14■□□□□ 0.01
TCOF1-209ENST00000506630 DOCK5Q9H7D0 1870 aa15.14■□□□□ 0.01
TCOF1-209ENST00000506630 LOC102724159A0A0B4J2E5 919 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 hCG_1642624A0A1W2PR95 340 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 MOXD2PA6NHM9 499 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 B4DLN1 442 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 OPLAHO14841 1288 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 ADAMTS4O75173 837 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 SEC24BO95487 1268 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 TIMP1P01033 207 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 CDC27P30260 824 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 MRPL12P52815 198 aaKnown RBP15.13■□□□□ 0.01
TCOF1-209ENST00000506630 PDE4DQ08499 809 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 PWP2Q15269 919 aaKnown RBP15.13■□□□□ 0.01
TCOF1-209ENST00000506630 FBXL16Q8N461 479 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 MORC4Q8TE76 937 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 TTC28Q96AY4 2481 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 GLT1D1Q96MS3 346 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 TAAR1Q96RJ0 339 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 AGXT2Q9BYV1 514 aa15.13■□□□□ 0.01
TCOF1-209ENST00000506630 VTA1Q9NP79 307 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms