RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SNX29Q8TEQ0 813 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 C16orf45Q96MC5 204 aaPredicted RBP13.72□□□□□ -0.21
LIN54-206ENST00000506560 ZNF341Q9BYN7 854 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 VCPKMTQ9H867 229 aa13.72□□□□□ -0.21
LIN54-206ENST00000506560 CNOT7Q9UIV1 285 aaKnown RBP13.72□□□□□ -0.21
LIN54-206ENST00000506560 MYMKA6NI61 221 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 NKRFO15226 690 aaKnown RBP eCLIP13.71□□□□□ -0.21
LIN54-206ENST00000506560 INPP5BP32019 993 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 ZNF280AP59817 542 aaPredicted RBP13.71□□□□□ -0.21
LIN54-206ENST00000506560 ARHGAP4P98171 946 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 STK4Q13043 487 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 PRR16Q569H4 304 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 NBPF12Q5TAG4 269 aaPredicted RBP13.71□□□□□ -0.21
LIN54-206ENST00000506560 DLK2Q6UY11 383 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 DYMQ7RTS9 669 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 CRYGNQ8WXF5 182 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 HACL1Q9UJ83 578 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 CCT6AP40227 531 aaKnown RBP13.71□□□□□ -0.21
LIN54-206ENST00000506560 ASIC1P78348 528 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 CDKAL1Q5VV42 579 aa13.71□□□□□ -0.21
LIN54-206ENST00000506560 RRP9O43818 475 aaKnown RBP13.71□□□□□ -0.22
LIN54-206ENST00000506560 TBC1D12O60347 775 aa13.71□□□□□ -0.22
LIN54-206ENST00000506560 CFBP00751 764 aa13.71□□□□□ -0.22
LIN54-206ENST00000506560 TNIP1Q15025 636 aa13.71□□□□□ -0.22
LIN54-206ENST00000506560 CCDC125Q86Z20 511 aa13.71□□□□□ -0.22
LIN54-206ENST00000506560 GLIS3Q8NEA6 775 aa13.71□□□□□ -0.22
LIN54-206ENST00000506560 LENG9Q96B70 501 aa13.71□□□□□ -0.22
LIN54-206ENST00000506560 PYM1Q9BRP8 204 aaKnown RBP13.71□□□□□ -0.22
LIN54-206ENST00000506560 FZD9O00144 591 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 PAK1Q13153 545 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 CEP135Q66GS9 1140 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 GOPCQ9HD26 462 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 PCDHA12Q9UN75 941 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 MARCH6O60337 910 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 TPM2P07951 284 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 ADKP55263 362 aaKnown RBP13.7□□□□□ -0.22
LIN54-206ENST00000506560 NR1I3Q14994 352 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 ADSSL1Q8N142 457 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 TRPM4Q8TD43 1214 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 CALML4Q96GE6 196 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 IMPACTQ9P2X3 320 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 CD2APQ9Y5K6 639 aa13.7□□□□□ -0.22
LIN54-206ENST00000506560 RHOBTB3O94955 611 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 SFPQP23246 707 aaKnown RBP eCLIP13.69□□□□□ -0.22
LIN54-206ENST00000506560 MAP3K10Q02779 954 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 PDE4DQ08499 809 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 TMEM266Q2M3C6 531 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 IRF2BP1Q8IU81 584 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 FEZ1Q99689 392 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 DEFB129Q9H1M3 183 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 KCNMB3Q9NPA1 279 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 A0A1B0GTH6 734 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 POTECB2RU33 542 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 E9PMD0 336 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 CACNB1Q02641 598 aaPredicted RBP13.69□□□□□ -0.22
LIN54-206ENST00000506560 ORC2Q13416 577 aaPredicted RBP13.69□□□□□ -0.22
LIN54-206ENST00000506560 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 KIAA0895Q8NCT3 520 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 LARP4BQ92615 738 aaKnown RBP13.69□□□□□ -0.22
LIN54-206ENST00000506560 AGBL1Q96MI9 1066 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 TAB2Q9NYJ8 693 aa13.69□□□□□ -0.22
LIN54-206ENST00000506560 CBFA2T2O43439 604 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 MMP14P50281 582 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 GSDMDP57764 484 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 RAD51AP2Q09MP3 1159 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 KRT31Q15323 416 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 TPD52L1Q16890 204 aaPredicted RBP13.68□□□□□ -0.22
LIN54-206ENST00000506560 KIF4BQ2VIQ3 1234 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 E4F1Q66K89 784 aaPredicted RBP13.68□□□□□ -0.22
LIN54-206ENST00000506560 GIMAP8Q8ND71 665 aaPredicted RBP13.68□□□□□ -0.22
LIN54-206ENST00000506560 ETNPPLQ8TBG4 499 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 C7orf25Q9BPX7 421 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 ADD3Q9UEY8 706 aaKnown RBP13.68□□□□□ -0.22
LIN54-206ENST00000506560 RWDD2AQ9UIY3 292 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 ASNSP08243 561 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 KRT79Q5XKE5 535 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 TSC1Q92574 1164 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
LIN54-206ENST00000506560 CDK5RAP3Q96JB5 506 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 VPS16Q9H269 839 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 RMND1Q9NWS8 449 aa13.68□□□□□ -0.22
LIN54-206ENST00000506560 NPHP3-ACAD11A0A0J9YXS1 232 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 MED24O75448 989 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 SREBF1P36956 1147 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 SPIRE1Q08AE8 756 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
LIN54-206ENST00000506560 PDIA5Q14554 519 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 KCNB1Q14721 858 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 TMEM119Q4V9L6 283 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 ANGEL2Q5VTE6 544 aaKnown RBP13.67□□□□□ -0.22
LIN54-206ENST00000506560 CPLX3Q8WVH0 158 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 RAD54LQ92698 747 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 ZKSCAN4Q969J2 545 aaPredicted RBP13.67□□□□□ -0.22
LIN54-206ENST00000506560 FGFBP2Q9BYJ0 223 aa13.67□□□□□ -0.22
LIN54-206ENST00000506560 RANBP17Q9H2T7 1088 aaKnown RBP13.67□□□□□ -0.22
LIN54-206ENST00000506560 POLD4Q9HCU8 107 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms