RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 SAMD3Q8N6K7 520 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 FANCBQ8NB91 859 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 GLT1D1Q96MS3 346 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
MED28-204ENST00000506409 MAP3K20Q9NYL2 800 aaKnown RBP17.99■□□□□ 0.47
MED28-204ENST00000506409 RBM27Q9P2N5 1060 aaKnown RBP17.99■□□□□ 0.47
MED28-204ENST00000506409 PRKAG2Q9UGJ0 569 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 SEC63Q9UGP8 760 aaKnown RBP17.99■□□□□ 0.47
MED28-204ENST00000506409 Q9Y3F1 56 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 SNX14Q9Y5W7 946 aa17.99■□□□□ 0.47
MED28-204ENST00000506409 RBM47A0AV96 593 aaKnown RBP17.98■□□□□ 0.47
MED28-204ENST00000506409 EIF2AK2P19525 551 aaKnown RBP17.98■□□□□ 0.47
MED28-204ENST00000506409 HOXA13P31271 388 aaPredicted RBP17.98■□□□□ 0.47
MED28-204ENST00000506409 FGD1P98174 961 aa17.98■□□□□ 0.47
MED28-204ENST00000506409 PPP2R5BQ15173 497 aa17.98■□□□□ 0.47
MED28-204ENST00000506409 FSCN1Q16658 493 aaKnown RBP17.98■□□□□ 0.47
MED28-204ENST00000506409 SCFD2Q8WU76 684 aa17.98■□□□□ 0.47
MED28-204ENST00000506409 IWS1Q96ST2 819 aa17.98■□□□□ 0.47
MED28-204ENST00000506409 PRO3102Q9H379 93 aa17.98■□□□□ 0.47
MED28-204ENST00000506409 ELP1O95163 1332 aa17.98■□□□□ 0.47
MED28-204ENST00000506409 GCOM1H8Y6P7 765 aaPredicted RBP17.97■□□□□ 0.47
MED28-204ENST00000506409 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
MED28-204ENST00000506409 POLR2MP0CAP2 368 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 MAGEA10P43363 369 aaPredicted RBP17.97■□□□□ 0.47
MED28-204ENST00000506409 TLE2Q04725 743 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 STXBP2Q15833 593 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 BLOC1S2Q6QNY1 142 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 TMTC3Q6ZXV5 915 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 VTI1AQ96AJ9 217 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 GDF15Q99988 308 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 PRDM5Q9NQX1 630 aaPredicted RBP17.97■□□□□ 0.47
MED28-204ENST00000506409 PXMP2Q9NR77 195 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 PCDH10Q9P2E7 1040 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 BRPF3Q9ULD4 1205 aa17.97■□□□□ 0.47
MED28-204ENST00000506409 TRIOBPQ9H2D6 2365 aa17.96■□□□□ 0.47
MED28-204ENST00000506409 RANBP2P49792 3224 aaKnown RBP17.96■□□□□ 0.47
MED28-204ENST00000506409 NKRFO15226 690 aaKnown RBP eCLIP17.96■□□□□ 0.47
MED28-204ENST00000506409 ZBTB43O43298 467 aa17.96■□□□□ 0.47
MED28-204ENST00000506409 ZEB2O60315 1214 aa17.96■□□□□ 0.47
MED28-204ENST00000506409 PQBP1O60828 265 aaKnown RBP17.96■□□□□ 0.47
MED28-204ENST00000506409 CPA1P15085 419 aa17.96■□□□□ 0.47
MED28-204ENST00000506409 TTLL4Q14679 1199 aa17.96■□□□□ 0.47
MED28-204ENST00000506409 CCDC82Q8N4S0 544 aa17.96■□□□□ 0.47
MED28-204ENST00000506409 RBM28Q9NW13 759 aaKnown RBP17.96■□□□□ 0.47
MED28-204ENST00000506409 KLF18A0A0U1RQI7 1052 aa17.95■□□□□ 0.46
MED28-204ENST00000506409 NR3C2P08235 984 aa17.95■□□□□ 0.46
MED28-204ENST00000506409 TXNP10599 105 aaKnown RBP17.95■□□□□ 0.46
MED28-204ENST00000506409 PSMA5P28066 241 aa17.95■□□□□ 0.46
MED28-204ENST00000506409 RTN1Q16799 776 aa17.95■□□□□ 0.46
MED28-204ENST00000506409 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
MED28-204ENST00000506409 SEPT14Q6ZU15 432 aa17.95■□□□□ 0.46
MED28-204ENST00000506409 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
MED28-204ENST00000506409 OR6J1Q8NGC5 347 aa17.95■□□□□ 0.46
MED28-204ENST00000506409 PDCD2LQ9BRP1 358 aa17.95■□□□□ 0.46
MED28-204ENST00000506409 NAP1L2Q9ULW6 460 aaPredicted RBP17.95■□□□□ 0.46
MED28-204ENST00000506409 A0A0U1RQG5 324 aaPredicted RBP17.94■□□□□ 0.46
MED28-204ENST00000506409 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
MED28-204ENST00000506409 GOLGA8AA7E2F4 631 aa17.94■□□□□ 0.46
MED28-204ENST00000506409 GOLGA8BA8MQT2 603 aa17.94■□□□□ 0.46
MED28-204ENST00000506409 EIF3JO75822 258 aaKnown RBP17.94■□□□□ 0.46
MED28-204ENST00000506409 CABYRO75952 493 aa17.94■□□□□ 0.46
MED28-204ENST00000506409 BMP8BP34820 402 aa17.94■□□□□ 0.46
MED28-204ENST00000506409 CPT1AP50416 773 aa17.94■□□□□ 0.46
MED28-204ENST00000506409 MDM2Q00987 491 aaPredicted RBP17.94■□□□□ 0.46
MED28-204ENST00000506409 Q6ZUG5 572 aa17.94■□□□□ 0.46
MED28-204ENST00000506409 ANKRD33Q7Z3H0 272 aa17.94■□□□□ 0.46
MED28-204ENST00000506409 LBHD1Q9BQE6 289 aaPredicted RBP17.94■□□□□ 0.46
MED28-204ENST00000506409 PDLIM7Q9NR12 457 aa17.94■□□□□ 0.46
MED28-204ENST00000506409 A0A1W2PPC1 479 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 ARIH2O95376 493 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 CLTBP09497 229 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 MYCLP12524 364 aaPredicted RBP17.93■□□□□ 0.46
MED28-204ENST00000506409 CASTP20810 708 aaKnown RBP17.93■□□□□ 0.46
MED28-204ENST00000506409 RPS6KB1P23443 525 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 RCAN1P53805 252 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 BRDTQ58F21 947 aaPredicted RBP17.93■□□□□ 0.46
MED28-204ENST00000506409 COPS5Q92905 334 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 BRF1Q92994 677 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 TOX2Q96NM4 488 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 MROH7Q68CQ1 1323 aa17.93■□□□□ 0.46
MED28-204ENST00000506409 DCDC2CA8MYV0 355 aa17.92■□□□□ 0.46
MED28-204ENST00000506409 ARVCFO00192 962 aa17.92■□□□□ 0.46
MED28-204ENST00000506409 APOBRQ0VD83 1088 aa17.92■□□□□ 0.46
MED28-204ENST00000506409 PGM5Q15124 567 aa17.92■□□□□ 0.46
MED28-204ENST00000506409 CCDC62Q6P9F0 684 aa17.92■□□□□ 0.46
MED28-204ENST00000506409 SH3RF1Q7Z6J0 888 aa17.92■□□□□ 0.46
MED28-204ENST00000506409 SMARCC2Q8TAQ2 1214 aa17.92■□□□□ 0.46
MED28-204ENST00000506409 CUL5Q93034 780 aa17.92■□□□□ 0.46
MED28-204ENST00000506409 UBE2OQ9C0C9 1292 aaKnown RBP17.92■□□□□ 0.46
MED28-204ENST00000506409 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
MED28-204ENST00000506409 TRIM43BA6NCK2 446 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 CCND2P30279 289 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 METAP2P50579 478 aaKnown RBP eCLIP17.91■□□□□ 0.46
MED28-204ENST00000506409 CDK7P50613 346 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 LY6KQ17RY6 165 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 USP17L6PQ6QN14 398 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 HEATR3Q7Z4Q2 680 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 VSIG10LQ86VR7 867 aa17.91■□□□□ 0.46
MED28-204ENST00000506409 FBXL16Q8N461 479 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms