RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 ZNF408Q9H9D4 720 aa13.59□□□□□ -0.23
POLR2J3-211ENST00000506060 GBA2Q9HCG7 927 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-211ENST00000506060 ANO10Q9NW15 660 aa13.59□□□□□ -0.23
POLR2J3-211ENST00000506060 PARP14Q460N5 1801 aa13.59□□□□□ -0.23
POLR2J3-211ENST00000506060 LOC285556D6RIA3 1793 aa13.58□□□□□ -0.23
POLR2J3-211ENST00000506060 OPLAHO14841 1288 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 IRF6O14896 467 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 SMC2O95347 1197 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 TDP2O95551 362 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 SLFN14P0C7P3 912 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 DEKP35659 375 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 TXKP42681 527 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 GRIN1Q05586 938 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 TYRO3Q06418 890 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 Q4G0T1 1027 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 SNRNP48Q6IEG0 339 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 EPSTI1Q96J88 318 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 CDK5RAP3Q96JB5 506 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 CLMNQ96JQ2 1002 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 MTMR9Q96QG7 549 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 MAGEF1Q9HAY2 307 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 RNF146Q9NTX7 359 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 KIAA1468Q9P260 1216 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 FBXO40Q9UH90 709 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 PNMA3Q9UL41 463 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 AGTPBP1Q9UPW5 1226 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 MRVI1Q9Y6F6 885 aa13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 RBBP6Q7Z6E9 1792 aaKnown RBP13.58□□□□□ -0.24
POLR2J3-211ENST00000506060 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 STAT3P40763 770 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 STAT6P42226 847 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 SETQ01105 290 aaPredicted RBP13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 DGKZQ13574 1117 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 UVSSAQ2YD98 709 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 LONRF3Q496Y0 759 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 RRAGBQ5VZM2 374 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 XRRA1Q6P2D8 792 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 LBX2Q6XYB7 198 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 RNF207Q6ZRF8 634 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 PDILTQ8N807 584 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 CHST13Q8NET6 341 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 CRYGNQ8WXF5 182 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 CLEC4DQ8WXI8 215 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 DHX58Q96C10 678 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 ACAD9Q9H845 621 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 LRWD1Q9UFC0 647 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 PCDHA12Q9UN75 941 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 SMCHD1A6NHR9 2005 aa13.57□□□□□ -0.24
POLR2J3-211ENST00000506060 SLC37A4O43826 429 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 CELF2O95319 508 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 MYL1P05976 194 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 CETPP11597 493 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 TECP42680 631 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 GTF2A2P52657 109 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 PLS1Q14651 629 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 POSTNQ15063 836 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 IL17AQ16552 155 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 PRR16Q569H4 304 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 KRT79Q5XKE5 535 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 MOB2Q70IA6 237 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 CABP7Q86V35 215 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 IGSF22Q8N9C0 903 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 REPS2Q8NFH8 660 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 ERMNQ8TAM6 284 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 FUCA2Q9BTY2 467 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 TTC12Q9H892 705 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 HOMER2Q9NSB8 354 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 SERTAD1Q9UHV2 236 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 KDM3AQ9Y4C1 1321 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 RLFQ13129 1914 aa13.56□□□□□ -0.24
POLR2J3-211ENST00000506060 COL11A1P12107 1806 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 TRAF5O00463 557 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 NFIBO00712 420 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 ACTN4O43707 911 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 SLC25A27O95847 323 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 AMPD3Q01432 767 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 NSMFQ6X4W1 530 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 NIPA1Q7RTP0 329 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 TRIML1Q8N9V2 468 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 SMARCE1Q969G3 411 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 CCDC47Q96A33 483 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 PANK2Q9BZ23 570 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 GTPBP4Q9BZE4 634 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 LRRC27Q9C0I9 530 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 NT5C3AQ9H0P0 336 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 KCNMB3Q9NPA1 279 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 DISC1Q9NRI5 854 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 DACH1Q9UI36 760 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 ZNF214Q9UL59 606 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 PFASO15067 1338 aa13.55□□□□□ -0.24
POLR2J3-211ENST00000506060 ZBTB48P10074 688 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-211ENST00000506060 RPS6P62753 249 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-211ENST00000506060 SEMA3FQ13275 785 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms