RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 RHBDL3P58872 404 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 LRRC41Q15345 812 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 VWA3BQ502W6 1294 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 HSP90B2PQ58FF3 399 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 PAPD7Q5XG87 772 aaKnown RBP8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 LARP4BQ92615 738 aaKnown RBP8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 GJA10Q969M2 543 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 DRC1Q96MC2 740 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 MTMR9Q96QG7 549 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 EIF3CQ99613 913 aaKnown RBP8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 NDST4Q9H3R1 872 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 BLOC1S4Q9NUP1 217 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 FAN1Q9Y2M0 1017 aa8.49□□□□□ -1.05
PPARGC1A-204ENST00000506055 SNED1Q8TER0 1413 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 ZNF263O14978 683 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 TNNT3P45378 269 aaPredicted RBP8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 TNNI2P48788 182 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 ADCY7P51828 1080 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 USP14P54578 494 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 ATP2B2Q01814 1243 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 TMEM266Q2M3C6 531 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 CENPPQ6IPU0 288 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 WDR93Q6P2C0 686 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 ZSCAN29Q8IWY8 852 aaPredicted RBP8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 SECISBP2LQ93073 1101 aaKnown RBP8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 ERGIC2Q96RQ1 377 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 NUDT12Q9BQG2 462 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 IFIH1Q9BYX4 1025 aaKnown RBP8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 DEF6Q9H4E7 631 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 TNRC6CQ9HCJ0 1690 aaKnown RBP8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 EP400Q96L91 3159 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 MARCH6O60337 910 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 TUBBP07437 444 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 IL1R1P14778 569 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 PPP1R2P41236 205 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 UBE2SQ16763 222 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 PRR5LQ6MZQ0 368 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 RRAGAQ7L523 313 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 CERS3Q8IU89 383 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 GLIS3Q8NEA6 775 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 SNX29Q8TEQ0 813 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 DDX12PQ92771 950 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 EXOC4Q96A65 974 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 PNMA5Q96PV4 448 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 TANGO6Q9C0B7 1094 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 RIOX1Q9H6W3 641 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 MTMR4Q9NYA4 1195 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 POLLQ9UGP5 575 aa8.48□□□□□ -1.05
PPARGC1A-204ENST00000506055 A0A1W2PQJ5 194 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 PDE2AO00408 941 aaPredicted RBP8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 RIMBP2O15034 1052 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 RAD21O60216 631 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 VAV2P52735 878 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 GTF2IP78347 998 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 VPS72Q15906 364 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 ZSCAN26Q16670 478 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 KRT79Q5XKE5 535 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 DPP8Q6V1X1 898 aaPredicted RBP8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 UNC13DQ70J99 1090 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 KCNK18Q7Z418 384 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 SLF2Q8IX21 1173 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 CCDC155Q8N6L0 562 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 PSMB7Q99436 277 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 RAB34Q9BZG1 259 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 ARHGAP20Q9P2F6 1191 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 PLAGL2Q9UPG8 496 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 PCDHA13Q9Y5I0 950 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 EDIL3O43854 480 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 AKR1B10O60218 316 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 USO1O60763 962 aaKnown RBP8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 MOCS3O95396 460 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 SSBP05455 408 aaKnown RBP eCLIP8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 AKR1B1P15121 316 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 CAPN2P17655 700 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 ATP2B4P23634 1241 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 SMARCA1P28370 1054 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 SLC16A2P36021 539 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 EIF4A3P38919 411 aaKnown RBP8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 FXR2P51116 673 aaKnown RBP eCLIP8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 C2orf54Q08AI8 447 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 FIGNQ5HY92 759 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 ZNF662Q6ZS27 426 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 GSPT2Q8IYD1 628 aaKnown RBP8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 ANKRD13CQ8N6S4 541 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 RAD54LQ92698 747 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 MLXIPQ9HAP2 919 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 TBC1D7Q9P0N9 293 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 STK17AQ9UEE5 414 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 NAV1Q8NEY1 1877 aa8.47□□□□□ -1.05
PPARGC1A-204ENST00000506055 DDX60LQ5H9U9 1706 aaKnown RBP8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 PVALEFA0A1B0GWK0 134 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 ESYT2A0FGR8 921 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 LRRC53A6NM62 1247 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 ZBTB22O15209 634 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 CXCR5P32302 372 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 MATR3P43243 847 aaKnown RBP eCLIP8.46□□□□□ -1.058e-7■■■□□ 19.1
PPARGC1A-204ENST00000506055 KIF11P52732 1056 aa8.46□□□□□ -1.05
PPARGC1A-204ENST00000506055 CKAP4Q07065 602 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms