RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 CNKSR3Q6P9H4 555 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 SESTD1Q86VW0 696 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 TTC14Q96N46 770 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 EPB41L4AQ9HCS5 686 aaPredicted RBP11.67□□□□□ -0.54
NEDD9-210ENST00000505589 U3KPZ7 1027 aaPredicted RBP11.67□□□□□ -0.54
NEDD9-210ENST00000505589 MCM3APO60318 1980 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.66□□□□□ -0.54
NEDD9-210ENST00000505589 RANBP6O60518 1105 aaKnown RBP11.66□□□□□ -0.54
NEDD9-210ENST00000505589 TOP1P11387 765 aaKnown RBP11.66□□□□□ -0.54
NEDD9-210ENST00000505589 SELPP16109 830 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 CALML3P27482 149 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 PTPROQ16827 1216 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 TICAM2Q86XR7 235 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 GJD3Q8N144 294 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 VWCEQ96DN2 955 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 YTHDC1Q96MU7 727 aaKnown RBP11.66□□□□□ -0.54
NEDD9-210ENST00000505589 SAMD11Q96NU1 681 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 UPF3BQ9BZI7 483 aaKnown RBP11.66□□□□□ -0.54
NEDD9-210ENST00000505589 DCTPP1Q9H773 170 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 TCP11L1Q9NUJ3 509 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
NEDD9-210ENST00000505589 INSL6Q9Y581 213 aa11.66□□□□□ -0.54
NEDD9-210ENST00000505589 MYH7P12883 1935 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 NCK2O43639 380 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 GJB5O95377 273 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 PCP11498 1178 aaKnown RBP11.65□□□□□ -0.54
NEDD9-210ENST00000505589 NOVP48745 357 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 ERVK-21P61565 698 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 DGKDQ16760 1214 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 LEXMQ3ZCV2 418 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 C7orf31Q8N865 590 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 IWS1Q96ST2 819 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 UBE2ZQ9H832 354 aaPredicted RBP11.65□□□□□ -0.54
NEDD9-210ENST00000505589 IL17RBQ9NRM6 502 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
NEDD9-210ENST00000505589 PRRC2BQ5JSZ5 2229 aaKnown RBP11.64□□□□□ -0.55
NEDD9-210ENST00000505589 WDR19Q8NEZ3 1342 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 M0R2C6 588 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 GH1P01241 217 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 CXCL10P02778 98 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 EDNRBP24530 442 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 SSTR3P32745 418 aaPredicted RBP11.64□□□□□ -0.55
NEDD9-210ENST00000505589 WDR5P61964 334 aaKnown RBP11.64□□□□□ -0.55
NEDD9-210ENST00000505589 RPS6P62753 249 aaKnown RBP11.64□□□□□ -0.55
NEDD9-210ENST00000505589 RBL2Q08999 1139 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 STXBP2Q15833 593 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 CCDC178Q5BJE1 867 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 ZMYM1Q5SVZ6 1142 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 GPATCH4Q5T3I0 446 aaKnown RBP11.64□□□□□ -0.55
NEDD9-210ENST00000505589 KCNV1Q6PIU1 500 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 LRRC8DQ7L1W4 858 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 MCF2L2Q86YR7 1114 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 FAM178BQ8IXR5 827 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 FSD1Q9BTV5 496 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 SUGCTQ9HAC7 445 aa11.64□□□□□ -0.55
NEDD9-210ENST00000505589 GBF1Q92538 1859 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 EMSYQ7Z589 1322 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 CHD9Q3L8U1 2897 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 ORC4O43929 436 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 SMARCA5O60264 1052 aaPredicted RBP11.63□□□□□ -0.55
NEDD9-210ENST00000505589 LPXNO60711 386 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 FGRP09769 529 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 SNAP25P60880 206 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 LAMC2Q13753 1193 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 TMEM63BQ5T3F8 832 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 NSUN6Q8TEA1 469 aaKnown RBP11.63□□□□□ -0.55
NEDD9-210ENST00000505589 TOMM22Q9NS69 142 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 PRKAG3Q9UGI9 489 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 MTMR7Q9Y216 660 aa11.63□□□□□ -0.55
NEDD9-210ENST00000505589 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.63□□□□□ -0.55
NEDD9-210ENST00000505589 EPOPA6NHQ4 379 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 NFIBO00712 420 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 AMHP03971 560 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 CKBP12277 381 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 CHMP4BP1P59074 171 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 PTK7Q13308 1070 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 ALX1Q15699 326 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 KRT40Q6A162 431 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 ALYREFQ86V81 257 aaKnown RBP11.62□□□□□ -0.55
NEDD9-210ENST00000505589 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
NEDD9-210ENST00000505589 GPCPD1Q9NPB8 672 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 HELLSQ9NRZ9 838 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 MAP3K20Q9NYL2 800 aaKnown RBP11.62□□□□□ -0.55
NEDD9-210ENST00000505589 GTF2IRD1Q9UHL9 959 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 CHD7Q9P2D1 2997 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
NEDD9-210ENST00000505589 LINC01553A4QN01 128 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 PPFIA4O75335 1185 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 EIF3JO75822 258 aaKnown RBP11.61□□□□□ -0.55
NEDD9-210ENST00000505589 MMP3P08254 477 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 KCNA5P22460 613 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 SLC16A2P36021 539 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 TIGD5Q53EQ6 642 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 TTBK2Q6IQ55 1244 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 PTCRAQ6ISU1 281 aaPredicted RBP11.61□□□□□ -0.55
NEDD9-210ENST00000505589 CCDC62Q6P9F0 684 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 FBXO22Q8NEZ5 403 aa11.61□□□□□ -0.55
NEDD9-210ENST00000505589 AFG1LQ8WV93 481 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms