RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ZBTB7AO95365 584 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 TUBBP07437 444 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 AKR1B1P15121 316 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 POLD1P28340 1107 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 DNM2P50570 870 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 TCP10Q12799 353 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 STIM1Q13586 685 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 AK8Q96MA6 479 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 DUSP9Q99956 384 aaKnown RBP18.94■□□□□ 0.62
LIN54-204ENST00000505397 EHD4Q9H223 541 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 CALCOCO1Q9P1Z2 691 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 PCDHAC2Q9Y5I4 1007 aa18.94■□□□□ 0.62
LIN54-204ENST00000505397 HDXQ7Z353 690 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 TRAPPC11Q7Z392 1133 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 IDI2Q9BXS1 227 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 TRIM34Q9BYJ4 488 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 ZMYND12Q9H0C1 365 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 MTMR4Q9NYA4 1195 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 KLRF2D3W0D1 207 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 ERLIN1O75477 346 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 GOLGA8HP0CJ92 632 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 KCNA3P22001 575 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 HERVK_113P62684 666 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 ABCB6Q9NP58 842 aa18.93■□□□□ 0.62
LIN54-204ENST00000505397 MPHOSPH10O00566 681 aaKnown RBP18.92■□□□□ 0.62
LIN54-204ENST00000505397 HEATR3Q7Z4Q2 680 aa18.92■□□□□ 0.62
LIN54-204ENST00000505397 TRIM47Q96LD4 638 aa18.92■□□□□ 0.62
LIN54-204ENST00000505397 ZNF277Q9NRM2 450 aaPredicted RBP18.92■□□□□ 0.62
LIN54-204ENST00000505397 PSD3Q9NYI0 1048 aa18.92■□□□□ 0.62
LIN54-204ENST00000505397 RASSF10A6NK89 507 aa18.92■□□□□ 0.62
LIN54-204ENST00000505397 SHMT1P34896 483 aa18.92■□□□□ 0.62
LIN54-204ENST00000505397 NOVP48745 357 aa18.92■□□□□ 0.62
LIN54-204ENST00000505397 SPZ1Q9BXG8 430 aa18.92■□□□□ 0.62
LIN54-204ENST00000505397 TRIM10Q9UDY6 481 aa18.92■□□□□ 0.62
LIN54-204ENST00000505397 VSNL1P62760 191 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 WDR93Q6P2C0 686 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 TXLNBQ8N3L3 684 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 RETREG2Q8NC44 543 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 C7orf25Q9BPX7 421 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 PIM2Q9P1W9 311 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 PI4KBQ9UBF8 816 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 MYH4Q9Y623 1939 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 TTLL1O95922 423 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 CCNE1P24864 410 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 COBLL1Q53SF7 1204 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 NOA1Q8NC60 698 aaKnown RBP18.91■□□□□ 0.62
LIN54-204ENST00000505397 RASSF8Q8NHQ8 419 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 NUP58Q9BVL2 599 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 TRIM9Q9C026 710 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 MAGEC2Q9UBF1 373 aaPredicted RBP18.91■□□□□ 0.62
LIN54-204ENST00000505397 GUCA1BQ9UMX6 200 aa18.91■□□□□ 0.62
LIN54-204ENST00000505397 NPM3O75607 178 aaKnown RBP18.9■□□□□ 0.62
LIN54-204ENST00000505397 PLCG1P19174 1290 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 EIF6P56537 245 aaKnown RBP18.9■□□□□ 0.62
LIN54-204ENST00000505397 TGFB2P61812 414 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 PAPD7Q5XG87 772 aaKnown RBP18.9■□□□□ 0.62
LIN54-204ENST00000505397 RSBN1LQ6PCB5 846 aaPredicted RBP18.9■□□□□ 0.62
LIN54-204ENST00000505397 CABP7Q86V35 215 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 ZFPM1Q8IX07 1006 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 EXOC4Q96A65 974 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 CCDC17Q96LX7 622 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 TUBGCP2Q9BSJ2 902 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 EXOC1Q9NV70 894 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 FAM198AQ9UFP1 575 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 HDAC9Q9UKV0 1011 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 SIPA1L1O43166 1804 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 RHOXF2BP0C7M4 288 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 LRRC47Q8N1G4 583 aaKnown RBP18.9■□□□□ 0.62
LIN54-204ENST00000505397 P2RX5Q93086 422 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 PLIN2Q99541 437 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 RHOXF2Q9BQY4 288 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 VPS33BQ9H267 617 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 TDRD3Q9H7E2 651 aaKnown RBP18.9■□□□□ 0.62
LIN54-204ENST00000505397 TMOD2Q9NZR1 351 aa18.9■□□□□ 0.62
LIN54-204ENST00000505397 SEC63Q9UGP8 760 aaKnown RBP18.9■□□□□ 0.62
LIN54-204ENST00000505397 ATF5Q9Y2D1 282 aaPredicted RBP18.9■□□□□ 0.62
LIN54-204ENST00000505397 B4DLN1 442 aa18.89■□□□□ 0.62
LIN54-204ENST00000505397 RAD17O75943 681 aa18.89■□□□□ 0.62
LIN54-204ENST00000505397 OR52Z1P0C646 297 aa18.89■□□□□ 0.62
LIN54-204ENST00000505397 HNRNPH2P55795 449 aaKnown RBP18.89■□□□□ 0.62
LIN54-204ENST00000505397 NCAPH2Q6IBW4 605 aa18.89■□□□□ 0.62
LIN54-204ENST00000505397 KRT25Q7Z3Z0 450 aa18.89■□□□□ 0.62
LIN54-204ENST00000505397 CSGALNACT2Q8N6G5 542 aa18.89■□□□□ 0.62
LIN54-204ENST00000505397 GBP3Q9H0R5 595 aa18.89■□□□□ 0.62
LIN54-204ENST00000505397 ADAM21Q9UKJ8 722 aa18.89■□□□□ 0.62
LIN54-204ENST00000505397 GREB1LQ9C091 1923 aaPredicted RBP18.89■□□□□ 0.61
LIN54-204ENST00000505397 IGKV6D-41A0A0C4DH26 115 aa18.89■□□□□ 0.61
LIN54-204ENST00000505397 BICDL2A1A5D9 508 aa18.89■□□□□ 0.61
LIN54-204ENST00000505397 PPP1R2P41236 205 aa18.89■□□□□ 0.61
LIN54-204ENST00000505397 KRT83P78385 493 aa18.89■□□□□ 0.61
LIN54-204ENST00000505397 GPS2Q13227 327 aa18.89■□□□□ 0.61
LIN54-204ENST00000505397 NIM1KQ8IY84 436 aa18.89■□□□□ 0.61
LIN54-204ENST00000505397 RRP36Q96EU6 259 aaKnown RBP18.89■□□□□ 0.61
LIN54-204ENST00000505397 MTFR1LQ9H019 292 aa18.89■□□□□ 0.61
LIN54-204ENST00000505397 PDE11AQ9HCR9 933 aa18.89■□□□□ 0.61
LIN54-204ENST00000505397 DDTLA6NHG4 134 aaPredicted RBP18.88■□□□□ 0.61
LIN54-204ENST00000505397 PDHBP11177 359 aa18.88■□□□□ 0.61
LIN54-204ENST00000505397 TSR1Q2NL82 804 aaKnown RBP18.88■□□□□ 0.61
LIN54-204ENST00000505397 ASPRV1Q53RT3 343 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms