RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 ZNF589Q86UQ0 364 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 CCDC155Q8N6L0 562 aa13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 WNT8AQ9H1J5 351 aa13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 NKX2-4Q9H2Z4 354 aa13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 DIAPH3Q9NSV4 1193 aa13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 CTNNA3Q9UI47 895 aa13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 DDX49Q9Y6V7 483 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
UBE2D3-219ENST00000505207 MYO9BQ13459 2157 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 ABCB11O95342 1321 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 KIF28PB7ZC32 967 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 PITPNM1O00562 1244 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 CYP2C9P11712 490 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 EDNRBP24530 442 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 NBPF20Q3BBV1 942 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 USH1GQ495M9 461 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 ASPRV1Q53RT3 343 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 TMEM67Q5HYA8 995 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 TMEM63BQ5T3F8 832 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 PPP2R2DQ66LE6 453 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 PNMA1Q8ND90 353 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 PHOSPHO2Q8TCD6 241 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 NSUN6Q8TEA1 469 aaKnown RBP13□□□□□ -0.33
UBE2D3-219ENST00000505207 SCLYQ96I15 445 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 IWS1Q96ST2 819 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
UBE2D3-219ENST00000505207 TRMT13Q9NUP7 481 aaKnown RBP13□□□□□ -0.33
UBE2D3-219ENST00000505207 MRPL11Q9Y3B7 192 aaKnown RBP13□□□□□ -0.33
UBE2D3-219ENST00000505207 DHX16O60231 1041 aaKnown RBP12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 PTGS1P23219 599 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 MRPS5P82675 430 aaKnown RBP12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 STXBP2Q15833 593 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 IMMTQ16891 758 aaKnown RBP12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 DEFB128Q7Z7B8 93 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 USP38Q8NB14 1042 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 ANKS1AQ92625 1134 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 SLC9A7Q96T83 725 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 KRT23Q9C075 422 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 FTOQ9C0B1 505 aaKnown RBP eCLIP12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 UBA5Q9GZZ9 404 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 OSBPL3Q9H4L5 887 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 CNNM2Q9H8M5 875 aa12.99□□□□□ -0.33
UBE2D3-219ENST00000505207 TTC28Q96AY4 2481 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 TNFRSF10AO00220 468 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 KDM4AO75164 1064 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 PARNO95453 639 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 GH1P01241 217 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 PARP1P09874 1014 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 CASTP20810 708 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 TRAF1Q13077 416 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 CDC37Q16543 378 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 AAK1Q2M2I8 961 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 CWC27Q6UX04 472 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 CHD1LQ86WJ1 897 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 FBXO11Q86XK2 927 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 TBC1D10CQ8IV04 446 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 ASB2Q96Q27 587 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 ZSCAN10Q96SZ4 725 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 ZKSCAN3Q9BRR0 538 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 UBAC1Q9BSL1 405 aa12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 YBX2Q9Y2T7 364 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-219ENST00000505207 SPDYE4A6NLX3 237 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 EIF3JO75822 258 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 IQCF3P0C7M6 154 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 RABGGTBP53611 331 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 CHMP4BP1P59074 171 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 ADGRE1Q14246 886 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 CCDC85BQ15834 202 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 ARHGEF16Q5VV41 709 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 SEPT14Q6ZU15 432 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 ADGRF4Q8IZF3 695 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 DSCC1Q9BVC3 393 aa12.97□□□□□ -0.33
UBE2D3-219ENST00000505207 NEDD4P46934 1319 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 BAIAP3O94812 1187 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 KCNJ6P48051 423 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 NUCB1Q02818 461 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 PTGISQ16647 500 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 DGKDQ16760 1214 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 PLEKHM2Q8IWE5 1019 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 SAMD3Q8N6K7 520 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 AFAP1L1Q8TED9 768 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 AFG1LQ8WV93 481 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 COPS5Q92905 334 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 KATNAL1Q9BW62 490 aa12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 MAP3K20Q9NYL2 800 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-219ENST00000505207 PRUNE2Q8WUY3 3088 aa12.95□□□□□ -0.34
UBE2D3-219ENST00000505207 B4E1Z4 1266 aa12.95□□□□□ -0.34
UBE2D3-219ENST00000505207 TRDNQ13061 729 aa12.95□□□□□ -0.34
UBE2D3-219ENST00000505207 LAMC2Q13753 1193 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms