RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 USP17L13C9JLJ4 530 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 USP17L11C9JVI0 530 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 USP17L18D6R9N7 530 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 USP17L22D6RA61 530 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 USP17L17D6RBQ6 530 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 USP17L19D6RCP7 530 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 USP17L20D6RJB6 530 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 M0R2N6 131 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 SPTLC2O15270 562 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 ZBED4O75132 1171 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 TRAPPC10P48553 1259 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 UBE2HP62256 183 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 USP17L24Q0WX57 530 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 NONOQ15233 471 aaKnown RBP eCLIP10.66□□□□□ -0.7
TPM3-218ENST00000505010 INF2Q27J81 1249 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 LRIT3Q3SXY7 679 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 TREML2Q5T2D2 321 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 NECAB2Q7Z6G3 386 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.66□□□□□ -0.7
TPM3-218ENST00000505010 LINC00301Q8NCQ3 95 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 GPT2Q8TD30 523 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 KCNG4Q8TDN1 519 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 ATG4CQ96DT6 458 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 PAWRQ96IZ0 340 aaKnown RBP10.66□□□□□ -0.7
TPM3-218ENST00000505010 PGBD1Q96JS3 809 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 DEFB118Q96PH6 123 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 RCOR1Q9UKL0 485 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 CEP131Q9UPN4 1083 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 PCDHB6Q9Y5E3 794 aa10.66□□□□□ -0.7
TPM3-218ENST00000505010 CXCL11O14625 94 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 ADCY3O60266 1144 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 ICAM1P05362 532 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 CATSPERGQ6ZRH7 1159 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 CPXCR1Q8N123 301 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 PROCA1Q8NCQ7 364 aaPredicted RBP10.65□□□□□ -0.7
TPM3-218ENST00000505010 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 SLC38A10Q9HBR0 1119 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 RAVER2Q9HCJ3 691 aaKnown RBP10.65□□□□□ -0.7
TPM3-218ENST00000505010 GABRQQ9UN88 632 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 KCNH4Q9UQ05 1017 aa10.65□□□□□ -0.7
TPM3-218ENST00000505010 MRPL11Q9Y3B7 192 aaKnown RBP10.65□□□□□ -0.7
TPM3-218ENST00000505010 ZNF536O15090 1300 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 VWA5AO00534 786 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 WNT7AO00755 349 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 INHAP05111 366 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 FDX1P10109 184 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 ALAS1P13196 640 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 MARCKSP29966 332 aaPredicted RBP10.64□□□□□ -0.71
TPM3-218ENST00000505010 DSG3P32926 999 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 MCM7P33993 719 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 IRX3P78415 501 aaPredicted RBP10.64□□□□□ -0.71
TPM3-218ENST00000505010 COG2Q14746 738 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 SLC39A14Q15043 492 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 PTPAQ15257 358 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 ZNF174Q15697 407 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 USP17L6PQ6QN14 398 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 NEK8Q86SG6 692 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 C7orf61Q8IZ16 206 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 TDHQ8IZJ6 230 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 PARK7Q99497 189 aaKnown RBP10.64□□□□□ -0.71
TPM3-218ENST00000505010 ANO3Q9BYT9 981 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.64□□□□□ -0.71
TPM3-218ENST00000505010 HOMER2Q9NSB8 354 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 PNMA2Q9UL42 364 aa10.64□□□□□ -0.71
TPM3-218ENST00000505010 ZMYND8Q9ULU4 1186 aaPredicted RBP10.64□□□□□ -0.71
TPM3-218ENST00000505010 ADGRA2Q96PE1 1338 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 SPDYE3A6NKU9 549 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 SPDYE16A6NNV3 312 aaPredicted RBP10.63□□□□□ -0.71
TPM3-218ENST00000505010 GCOM1H8Y6P7 765 aaPredicted RBP10.63□□□□□ -0.71
TPM3-218ENST00000505010 OPLAHO14841 1288 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 PPP6R2O75170 966 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 BMP15O95972 392 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 CFBP00751 764 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 POLR2MP0CAP2 368 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 BCRP11274 1271 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 ELNP15502 786 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 HOXA13P31271 388 aaPredicted RBP10.63□□□□□ -0.71
TPM3-218ENST00000505010 CLK2P49760 499 aaKnown RBP10.63□□□□□ -0.71
TPM3-218ENST00000505010 FLT3LGP49771 235 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 PABPC4Q13310 644 aaKnown RBP eCLIP10.63□□□□□ -0.71
TPM3-218ENST00000505010 AP3B2Q13367 1082 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 LETM2Q2VYF4 491 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 MCTP2Q6DN12 878 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 SNRNP48Q6IEG0 339 aaKnown RBP10.63□□□□□ -0.71
TPM3-218ENST00000505010 CAVIN1Q6NZI2 390 aaKnown RBP10.63□□□□□ -0.71
TPM3-218ENST00000505010 FASTKD5Q7L8L6 764 aaKnown RBP10.63□□□□□ -0.71
TPM3-218ENST00000505010 FSIP1Q8NA03 581 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 TBCKQ8TEA7 893 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 CRISPLD2Q9H0B8 497 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 PAK6Q9NQU5 681 aaPredicted RBP10.63□□□□□ -0.71
TPM3-218ENST00000505010 PCDHA7Q9UN72 937 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 AGTPBP1Q9UPW5 1226 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 LAMA2P24043 3122 aaKnown RBP10.63□□□□□ -0.71
TPM3-218ENST00000505010 EYSQ5T1H1 3165 aa10.63□□□□□ -0.71
TPM3-218ENST00000505010 LCTP09848 1927 aa10.62□□□□□ -0.71
TPM3-218ENST00000505010 PIK3CDO00329 1044 aa10.62□□□□□ -0.71
TPM3-218ENST00000505010 MEIS2O14770 477 aa10.62□□□□□ -0.71
TPM3-218ENST00000505010 CCNT1O60563 726 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms