RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 LRRC41Q15345 812 aa23.82■■□□□ 1.4
DDR1-255ENST00000504927 HEATR3Q7Z4Q2 680 aa23.82■■□□□ 1.4
DDR1-255ENST00000504927 FBXO16Q8IX29 292 aaPredicted RBP23.82■■□□□ 1.4
DDR1-255ENST00000504927 Q9Y3F1 56 aa23.82■■□□□ 1.4
DDR1-255ENST00000504927 RBM47A0AV96 593 aaKnown RBP23.81■■□□□ 1.4
DDR1-255ENST00000504927 PRPF3O43395 683 aaKnown RBP23.81■■□□□ 1.4
DDR1-255ENST00000504927 COL6A1P12109 1028 aa23.81■■□□□ 1.4
DDR1-255ENST00000504927 AKAP17AQ02040 695 aaKnown RBP23.81■■□□□ 1.4
DDR1-255ENST00000504927 GJC2Q5T442 439 aaPredicted RBP23.81■■□□□ 1.4
DDR1-255ENST00000504927 NOL8Q76FK4 1167 aaKnown RBP23.81■■□□□ 1.4
DDR1-255ENST00000504927 SMARCC2Q8TAQ2 1214 aa23.81■■□□□ 1.4
DDR1-255ENST00000504927 DDX49Q9Y6V7 483 aaKnown RBP23.81■■□□□ 1.4
DDR1-255ENST00000504927 EIF3JO75822 258 aaKnown RBP23.8■■□□□ 1.4
DDR1-255ENST00000504927 PGK1P00558 417 aa23.8■■□□□ 1.4
DDR1-255ENST00000504927 NR3C2P08235 984 aa23.8■■□□□ 1.4
DDR1-255ENST00000504927 IFNAR1P17181 557 aa23.8■■□□□ 1.4
DDR1-255ENST00000504927 ADCYAP1R1P41586 468 aa23.8■■□□□ 1.4
DDR1-255ENST00000504927 GJA9P57773 515 aa23.8■■□□□ 1.4
DDR1-255ENST00000504927 CCT2P78371 535 aaKnown RBP23.8■■□□□ 1.4
DDR1-255ENST00000504927 FCHSD1Q86WN1 690 aa23.8■■□□□ 1.4
DDR1-255ENST00000504927 TSEN34Q9BSV6 310 aaKnown RBP23.8■■□□□ 1.4
DDR1-255ENST00000504927 PDGFCQ9NRA1 345 aa23.8■■□□□ 1.4
DDR1-255ENST00000504927 GNEQ9Y223 722 aaKnown RBP23.8■■□□□ 1.4
DDR1-255ENST00000504927 ADAMTS4O75173 837 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 MYCNP04198 464 aaPredicted RBP23.79■■□□□ 1.4
DDR1-255ENST00000504927 EIF2AK2P19525 551 aaKnown RBP23.79■■□□□ 1.4
DDR1-255ENST00000504927 NEK4P51957 841 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 NKX3-2P78367 333 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 NTRK3Q16288 839 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 PFKFB3Q16875 520 aaPredicted RBP23.79■■□□□ 1.4
DDR1-255ENST00000504927 PPP1R18Q6NYC8 613 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 CPLX2Q6PUV4 134 aaKnown RBP23.79■■□□□ 1.4
DDR1-255ENST00000504927 SCFD2Q8WU76 684 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 DPF3Q92784 378 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 PDCD2LQ9BRP1 358 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 WDR11Q9BZH6 1224 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 GLT8D2Q9H1C3 349 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 UPF3AQ9H1J1 476 aaKnown RBP23.79■■□□□ 1.4
DDR1-255ENST00000504927 UPF2Q9HAU5 1272 aaKnown RBP23.79■■□□□ 1.4
DDR1-255ENST00000504927 BARHL2Q9NY43 387 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 DNAH12Q6ZR08 3092 aa23.79■■□□□ 1.4
DDR1-255ENST00000504927 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.78■■□□□ 1.4
DDR1-255ENST00000504927 MEIS2O14770 477 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 CPLX1O14810 134 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 NKRFO15226 690 aaKnown RBP eCLIP23.78■■□□□ 1.4
DDR1-255ENST00000504927 SMPD1P17405 629 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 CST5P28325 142 aaPredicted RBP23.78■■□□□ 1.4
DDR1-255ENST00000504927 DUSP28Q4G0W2 176 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 WWC2Q6AWC2 1192 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 VSIG10LQ86VR7 867 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 KLHDC9Q8NEP7 349 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 GPKOWQ92917 476 aaPredicted RBP eCLIP23.78■■□□□ 1.4
DDR1-255ENST00000504927 LARP6Q9BRS8 491 aaKnown RBP23.78■■□□□ 1.4
DDR1-255ENST00000504927 RNF26Q9BY78 433 aaPredicted RBP23.78■■□□□ 1.4
DDR1-255ENST00000504927 C22orf23Q9BZE7 217 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 SENP6Q9GZR1 1112 aaPredicted RBP23.78■■□□□ 1.4
DDR1-255ENST00000504927 AP5M1Q9H0R1 490 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 LCTP09848 1927 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 ALPK3Q96L96 1907 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 SYNRGQ9UMZ2 1314 aa23.78■■□□□ 1.4
DDR1-255ENST00000504927 ADCY6O43306 1168 aa23.77■■□□□ 1.4
DDR1-255ENST00000504927 SCG2P13521 617 aa23.77■■□□□ 1.4
DDR1-255ENST00000504927 NAPAP54920 295 aa23.77■■□□□ 1.4
DDR1-255ENST00000504927 TTLL4Q14679 1199 aa23.77■■□□□ 1.4
DDR1-255ENST00000504927 PGM5Q15124 567 aa23.77■■□□□ 1.4
DDR1-255ENST00000504927 USP17L6PQ6QN14 398 aa23.77■■□□□ 1.4
DDR1-255ENST00000504927 PCSK9Q8NBP7 692 aaKnown RBP23.77■■□□□ 1.4
DDR1-255ENST00000504927 LENG1Q96BZ8 264 aaPredicted RBP23.77■■□□□ 1.4
DDR1-255ENST00000504927 SLKQ9H2G2 1235 aaPredicted RBP23.77■■□□□ 1.4
DDR1-255ENST00000504927 NCOA5Q9HCD5 579 aaKnown RBP23.77■■□□□ 1.4
DDR1-255ENST00000504927 MCM3APO60318 1980 aa23.77■■□□□ 1.4
DDR1-255ENST00000504927 C6orf222P0C671 652 aaPredicted RBP23.76■■□□□ 1.39
DDR1-255ENST00000504927 CCND2P30279 289 aa23.76■■□□□ 1.39
DDR1-255ENST00000504927 RBM25P49756 843 aaKnown RBP23.76■■□□□ 1.39
DDR1-255ENST00000504927 AK2P54819 239 aa23.76■■□□□ 1.39
DDR1-255ENST00000504927 PRPF38BQ5VTL8 546 aaKnown RBP23.76■■□□□ 1.39
DDR1-255ENST00000504927 TLK2Q86UE8 772 aa23.76■■□□□ 1.39
DDR1-255ENST00000504927 TRIM22Q8IYM9 498 aa23.76■■□□□ 1.39
DDR1-255ENST00000504927 CCDC12Q8WUD4 166 aaPredicted RBP23.76■■□□□ 1.39
DDR1-255ENST00000504927 RIC8AQ9NPQ8 531 aa23.76■■□□□ 1.39
DDR1-255ENST00000504927 PHF24Q9UPV7 400 aa23.76■■□□□ 1.39
DDR1-255ENST00000504927 MOXD2PA6NHM9 499 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 STXBP3O00186 592 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 DYNC1LI2O43237 492 aaPredicted RBP23.75■■□□□ 1.39
DDR1-255ENST00000504927 STAM2O75886 525 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 MYCLP12524 364 aaPredicted RBP23.75■■□□□ 1.39
DDR1-255ENST00000504927 SSRP1Q08945 709 aaKnown RBP23.75■■□□□ 1.39
DDR1-255ENST00000504927 STK3Q13188 491 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 GNASQ5JWF2 1037 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 XRRA1Q6P2D8 792 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 KCNV1Q6PIU1 500 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 IL27Q8NEV9 243 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 PHKBQ93100 1093 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 SLC26A6Q9BXS9 759 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 TPCN1Q9ULQ1 816 aa23.75■■□□□ 1.39
DDR1-255ENST00000504927 SMCO2A6NFE2 343 aa23.74■■□□□ 1.39
DDR1-255ENST00000504927 ZEB2O60315 1214 aa23.74■■□□□ 1.39
DDR1-255ENST00000504927 EVI5O60447 810 aa23.74■■□□□ 1.39
DDR1-255ENST00000504927 PFKFB2O60825 505 aa23.74■■□□□ 1.39
DDR1-255ENST00000504927 CDKL5O76039 1030 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms