RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 SLC9C1Q4G0N8 1177 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 DCAF4Q8WV16 495 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 TMEM39BQ9GZU3 492 aa15.6■□□□□ 0.09
TCOF1-207ENST00000504761 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
TCOF1-207ENST00000504761 KMT5BQ4FZB7 885 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 OTUD6AQ7L8S5 288 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 NUP58Q9BVL2 599 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 CARD6Q9BX69 1037 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 CNOT7Q9UIV1 285 aaKnown RBP15.59■□□□□ 0.09
TCOF1-207ENST00000504761 KIF1AQ12756 1690 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 CLIC2O15247 247 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 LSM14BQ9BX40 385 aaKnown RBP15.59■□□□□ 0.09
TCOF1-207ENST00000504761 BCCIPQ9P287 314 aaKnown RBP eCLIP15.59■□□□□ 0.09
TCOF1-207ENST00000504761 EXOC7Q9UPT5 735 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 PEAK1Q9H792 1746 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 TCRBV5S4A2TA0A5A2 114 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 TNFAIP3P21580 790 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 DNM2P50570 870 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 TERF1P54274 439 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 ASIC2Q16515 512 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 HHIPL2Q6UWX4 724 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 C16orf86Q6ZW13 317 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 SAMD7Q7Z3H4 446 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 JAKMIP2Q96AA8 810 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 TRPC6Q9Y210 931 aa15.59■□□□□ 0.09
TCOF1-207ENST00000504761 PTPROQ16827 1216 aa15.58■□□□□ 0.09
TCOF1-207ENST00000504761 WDR44Q5JSH3 913 aa15.58■□□□□ 0.09
TCOF1-207ENST00000504761 FAM160B2Q86V87 743 aa15.58■□□□□ 0.09
TCOF1-207ENST00000504761 PRMT6Q96LA8 375 aaPredicted RBP15.58■□□□□ 0.09
TCOF1-207ENST00000504761 ERICH4A6NGS2 130 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 NDUFB10O96000 172 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 PLA2G4BP0C869 781 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 TNNI1P19237 187 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 IGBP1P78318 339 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 ARHGAP4P98171 946 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 ZNF658Q5TYW1 1059 aaPredicted RBP15.58■□□□□ 0.08
TCOF1-207ENST00000504761 IKBKBO14920 756 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 NR2F2P24468 414 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 KCTD2Q14681 263 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 ANKRD13CQ8N6S4 541 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 P2RX5Q93086 422 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 DEPTORQ8TB45 409 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 CUEDC2Q9H467 287 aa15.58■□□□□ 0.08
TCOF1-207ENST00000504761 LRRIQ4A6NIV6 560 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 U2AF2P26368 475 aaKnown RBP eCLIP15.57■□□□□ 0.08
TCOF1-207ENST00000504761 PPP4CP60510 307 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 CKAP4Q07065 602 aaKnown RBP15.57■□□□□ 0.08
TCOF1-207ENST00000504761 ZNF543Q08ER8 600 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 IFFO1Q0D2I5 559 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 KIAA0753Q2KHM9 967 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 RSBN1LQ6PCB5 846 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-207ENST00000504761 KCNQ5Q9NR82 932 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 NT5C2P49902 561 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 LEKR1Q6ZMV7 388 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 ARFGAP3Q9NP61 516 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 ZNF70Q9UC06 446 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-207ENST00000504761 E9PMD0 336 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 DLATP10515 647 aaKnown RBP15.57■□□□□ 0.08
TCOF1-207ENST00000504761 PDHBP11177 359 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 STAT3P40763 770 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 POLR2FP61218 127 aaKnown RBP15.57■□□□□ 0.08
TCOF1-207ENST00000504761 ENOX1Q8TC92 643 aaKnown RBP15.57■□□□□ 0.08
TCOF1-207ENST00000504761 TRIM49BA6NDI0 452 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 RRP9O43818 475 aaKnown RBP15.57■□□□□ 0.08
TCOF1-207ENST00000504761 EVCP57679 992 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 STYK1Q6J9G0 422 aa15.57■□□□□ 0.08
TCOF1-207ENST00000504761 ANKRD26Q9UPS8 1709 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 POTEB2H3BUK9 544 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 GRIN1Q05586 938 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 GRIK5Q16478 980 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 SFMBT2Q5VUG0 894 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 PHF20Q9BVI0 1012 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 STK17AQ9UEE5 414 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 HERC5Q9UII4 1024 aaKnown RBP15.56■□□□□ 0.08
TCOF1-207ENST00000504761 NEBLO76041 1014 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 CEP112Q8N8E3 955 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 GOLGA1Q92805 767 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 RMDN3Q96TC7 470 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 WDR11Q9BZH6 1224 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 SEPT9Q9UHD8 586 aaPredicted RBP15.56■□□□□ 0.08
TCOF1-207ENST00000504761 POTEB3A0JP26 581 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 POTECB2RU33 542 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 POTEBQ6S5H4 581 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 RNF207Q6ZRF8 634 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 SELENOOQ9BVL4 669 aa15.56■□□□□ 0.08
TCOF1-207ENST00000504761 KRT19P08727 400 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 DDIT3P35638 169 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 POLGP54098 1239 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-207ENST00000504761 ST3GAL1Q11201 340 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 DHX37Q8IY37 1157 aaKnown RBP15.55■□□□□ 0.08
TCOF1-207ENST00000504761 DDX12PQ92771 950 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 RTFDC1Q9BY42 306 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-207ENST00000504761 IFIH1Q9BYX4 1025 aaKnown RBP15.55■□□□□ 0.08
TCOF1-207ENST00000504761 TRPC3Q13507 836 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 ARMCX5Q6P1M9 558 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 NAPGQ99747 312 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-207ENST00000504761 SPZ1Q9BXG8 430 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 PCIF1Q9H4Z3 704 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 MAGEF1Q9HAY2 307 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 ANAPC4Q9UJX5 808 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms