RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 PRDM1O75626 825 aa11.25□□□□□ -0.61
ITGA1-203ENST00000504669 ATP6V1G2O95670 118 aa11.25□□□□□ -0.61
ITGA1-203ENST00000504669 CCNCP24863 283 aa11.25□□□□□ -0.61
ITGA1-203ENST00000504669 HMOX2P30519 316 aa11.25□□□□□ -0.61
ITGA1-203ENST00000504669 PEX5P50542 639 aa11.25□□□□□ -0.61
ITGA1-203ENST00000504669 TMED2Q15363 201 aa11.25□□□□□ -0.61
ITGA1-203ENST00000504669 TMEM63BQ5T3F8 832 aa11.25□□□□□ -0.61
ITGA1-203ENST00000504669 EHMT1Q9H9B1 1298 aa11.25□□□□□ -0.61
ITGA1-203ENST00000504669 A0A1B0GVL5 298 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 KCNK3O14649 394 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 IMPDH2P12268 514 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 EIF3BP55884 814 aaKnown RBP11.24□□□□□ -0.61
ITGA1-203ENST00000504669 PPP2R2AP63151 447 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 CCDC153Q494R4 210 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 ANKRD35Q8N283 1001 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 ABCF3Q9NUQ8 709 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 NACADO15069 1562 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 PLEKHG2Q9H7P9 1386 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 ZNF644Q9H582 1327 aaPredicted RBP11.24□□□□□ -0.61
ITGA1-203ENST00000504669 FAM170AA1A519 330 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 TRIM43BA6NCK2 446 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 TRIM64A6NGJ6 449 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 TRIM64BA6NI03 449 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 RARSP54136 660 aaKnown RBP11.24□□□□□ -0.61
ITGA1-203ENST00000504669 BNIP1Q12981 228 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 KRT81Q14533 505 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 RPS6KA2Q15349 733 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 CNGA3Q16281 694 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 TEDDM1Q5T9Z0 273 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 ATG16L1Q676U5 607 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 STK32CQ86UX6 486 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 KAT14Q9H8E8 782 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 WBP11Q9Y2W2 641 aaKnown RBP11.24□□□□□ -0.61
ITGA1-203ENST00000504669 TRIM64CA6NLI5 447 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 BMP15O95972 392 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 FOSL1P15407 271 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 GABPAQ06546 454 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 SLC9C1Q4G0N8 1177 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 FAM9CQ8IZT9 166 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 MDM2Q00987 491 aaPredicted RBP11.24□□□□□ -0.61
ITGA1-203ENST00000504669 PPP2R5EQ16537 467 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 CDHR1Q96JP9 859 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 TRAPPC9Q96Q05 1148 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 CCDC90BQ9GZT6 254 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 DCDC2Q9UHG0 476 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 GSTA4O15217 222 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 PPIP5K2O43314 1243 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 LZTS3O60299 673 aaPredicted RBP11.24□□□□□ -0.61
ITGA1-203ENST00000504669 R3HDM1Q15032 1099 aaKnown RBP11.24□□□□□ -0.61
ITGA1-203ENST00000504669 STX19Q8N4C7 294 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 RTL3Q8N8U3 475 aaKnown RBP11.24□□□□□ -0.61
ITGA1-203ENST00000504669 COG3Q96JB2 828 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 SLC39A3Q9BRY0 314 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 CNPY3Q9BT09 278 aa11.24□□□□□ -0.61
ITGA1-203ENST00000504669 HEXIM1O94992 359 aaKnown RBP11.23□□□□□ -0.61
ITGA1-203ENST00000504669 CCNHP51946 323 aaPredicted RBP11.23□□□□□ -0.61
ITGA1-203ENST00000504669 VCPP55072 806 aaKnown RBP11.23□□□□□ -0.61
ITGA1-203ENST00000504669 NCAPH2Q6IBW4 605 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 AGGF1Q8N302 714 aaeCLIP11.23□□□□□ -0.61
ITGA1-203ENST00000504669 MPP6Q9NZW5 540 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 PITPNM2Q9BZ72 1349 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 TNNC2P02585 160 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 MAGEA1P43355 309 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 KCNA1Q09470 495 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 ATP13A5Q4VNC0 1218 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 MAML1Q92585 1016 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 RUNDC3BQ96NL0 473 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 PARVAQ9NVD7 372 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 C2CD2Q9Y426 696 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 NOP56O00567 594 aaKnown RBP11.23□□□□□ -0.61
ITGA1-203ENST00000504669 HMOX1P09601 288 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 PITPNM3Q9BZ71 974 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 CCDC162PA2VCL2 907 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 RASSF9O75901 435 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 RALGDSQ12967 914 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 TSHZ1Q6ZSZ6 1077 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 NT5C3AQ9H0P0 336 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 UPF3AQ9H1J1 476 aaKnown RBP11.23□□□□□ -0.61
ITGA1-203ENST00000504669 SEC63Q9UGP8 760 aaKnown RBP11.23□□□□□ -0.61
ITGA1-203ENST00000504669 CCDC194A0A1B0GVG4 234 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 TRIM37O94972 964 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 AK2P54819 239 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 ADRM1Q16186 407 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 RNF207Q6ZRF8 634 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 ZKSCAN4Q969J2 545 aaPredicted RBP11.23□□□□□ -0.61
ITGA1-203ENST00000504669 LENG1Q96BZ8 264 aaPredicted RBP11.23□□□□□ -0.61
ITGA1-203ENST00000504669 CHMP6Q96FZ7 201 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 ESYT1Q9BSJ8 1104 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 BEGAINQ9BUH8 593 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 FAM192AQ9GZU8 254 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 FANCEQ9HB96 536 aa11.23□□□□□ -0.61
ITGA1-203ENST00000504669 IARSP41252 1262 aaKnown RBP11.22□□□□□ -0.61
ITGA1-203ENST00000504669 METAP2P50579 478 aaKnown RBP eCLIP11.22□□□□□ -0.61
ITGA1-203ENST00000504669 ASPHQ12797 758 aa11.22□□□□□ -0.61
ITGA1-203ENST00000504669 RAPGEF1Q13905 1077 aa11.22□□□□□ -0.61
ITGA1-203ENST00000504669 RFX8Q6ZV50 586 aa11.22□□□□□ -0.61
ITGA1-203ENST00000504669 GPR141Q7Z602 305 aa11.22□□□□□ -0.61
ITGA1-203ENST00000504669 CCDC84Q86UT8 332 aaPredicted RBP11.22□□□□□ -0.61
ITGA1-203ENST00000504669 ZNF285Q96NJ3 590 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms