RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 NFKB2Q00653 900 aa6.56□□□□□ -1.36
SUB1-204ENST00000504016 GRB10Q13322 594 aa6.56□□□□□ -1.36
SUB1-204ENST00000504016 FERMT3Q86UX7 667 aa6.56□□□□□ -1.36
SUB1-204ENST00000504016 SMARCC2Q8TAQ2 1214 aa6.56□□□□□ -1.36
SUB1-204ENST00000504016 KLHL6Q8WZ60 621 aa6.56□□□□□ -1.36
SUB1-204ENST00000504016 MRVI1Q9Y6F6 885 aa6.56□□□□□ -1.36
SUB1-204ENST00000504016 DNAJA1P31689 397 aaKnown RBP6.55□□□□□ -1.36
SUB1-204ENST00000504016 GJA8P48165 433 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 KRTAP10-2P60368 255 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 DLX2Q07687 328 aaPredicted RBP6.55□□□□□ -1.36
SUB1-204ENST00000504016 WWC2Q6AWC2 1192 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 KIAA1211LQ6NV74 962 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 GGNQ86UU5 652 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 CARFQ8N187 725 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 RASGRP4Q8TDF6 673 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 BORCS6Q96GS4 357 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 MTA3Q9BTC8 594 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 AKT3Q9Y243 479 aa6.55□□□□□ -1.36
SUB1-204ENST00000504016 C7orf72A4D263 438 aa6.54□□□□□ -1.36
SUB1-204ENST00000504016 FUCA1P04066 466 aa6.54□□□□□ -1.36
SUB1-204ENST00000504016 CACNB2Q08289 660 aaPredicted RBP6.54□□□□□ -1.36
SUB1-204ENST00000504016 EFEMP1Q12805 493 aa6.54□□□□□ -1.36
SUB1-204ENST00000504016 VPS37DQ86XT2 251 aa6.54□□□□□ -1.36
SUB1-204ENST00000504016 CPA5Q8WXQ8 436 aa6.54□□□□□ -1.36
SUB1-204ENST00000504016 DDX1Q92499 740 aaKnown RBP6.54□□□□□ -1.36
SUB1-204ENST00000504016 ANAPC16Q96DE5 110 aa6.54□□□□□ -1.36
SUB1-204ENST00000504016 NOX5Q96PH1 765 aa6.54□□□□□ -1.36
SUB1-204ENST00000504016 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.54□□□□□ -1.36
SUB1-204ENST00000504016 ANKRD34BA5PLL1 514 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 KCNH1O95259 989 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 NTRK1P04629 796 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 ATF4P18848 351 aaPredicted RBP6.53□□□□□ -1.36
SUB1-204ENST00000504016 SARSP49591 514 aaKnown RBP6.53□□□□□ -1.36
SUB1-204ENST00000504016 GJA9P57773 515 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 RBM10P98175 930 aaKnown RBP6.53□□□□□ -1.36
SUB1-204ENST00000504016 GNL2Q13823 731 aaKnown RBP6.53□□□□□ -1.36
SUB1-204ENST00000504016 VHLLQ6RSH7 139 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 TTLL7Q6ZT98 887 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 ZBTB8AQ96BR9 441 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 APBA2Q99767 749 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 TINF2Q9BSI4 451 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 NTMQ9P121 344 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 CLEC1BQ9P126 229 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 SIT1Q9Y3P8 196 aa6.53□□□□□ -1.36
SUB1-204ENST00000504016 K7ESM1 405 aa6.52□□□□□ -1.37
SUB1-204ENST00000504016 NOBOXO60393 691 aa6.52□□□□□ -1.37
SUB1-204ENST00000504016 CASP7P55210 303 aa6.52□□□□□ -1.37
SUB1-204ENST00000504016 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
SUB1-204ENST00000504016 POMZP3Q6PJE2 187 aa6.52□□□□□ -1.37
SUB1-204ENST00000504016 DDX11Q96FC9 970 aa6.52□□□□□ -1.37
SUB1-204ENST00000504016 SHDQ96IW2 340 aa6.52□□□□□ -1.37
SUB1-204ENST00000504016 GPRC5CQ9NQ84 441 aa6.52□□□□□ -1.37
SUB1-204ENST00000504016 NOP56O00567 594 aaKnown RBP6.51□□□□□ -1.37
SUB1-204ENST00000504016 SMARCA5O60264 1052 aaPredicted RBP6.51□□□□□ -1.37
SUB1-204ENST00000504016 SSBP05455 408 aaKnown RBP eCLIP6.51□□□□□ -1.37
SUB1-204ENST00000504016 PLS3P13797 630 aa6.51□□□□□ -1.37
SUB1-204ENST00000504016 CNR2P34972 360 aa6.51□□□□□ -1.37
SUB1-204ENST00000504016 SCRN1Q12765 414 aa6.51□□□□□ -1.37
SUB1-204ENST00000504016 SMAD4Q13485 552 aaKnown RBP6.51□□□□□ -1.37
SUB1-204ENST00000504016 CRACR2BQ8N4Y2 399 aaPredicted RBP6.51□□□□□ -1.37
SUB1-204ENST00000504016 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.51□□□□□ -1.37
SUB1-204ENST00000504016 SPATA6Q9NWH7 488 aaPredicted RBP6.51□□□□□ -1.37
SUB1-204ENST00000504016 BTG4Q9NY30 223 aa6.51□□□□□ -1.37
SUB1-204ENST00000504016 MARCH2Q9P0N8 246 aa6.51□□□□□ -1.37
SUB1-204ENST00000504016 APEX2Q9UBZ4 518 aa6.51□□□□□ -1.37
SUB1-204ENST00000504016 CNOT11Q9UKZ1 510 aaKnown RBP6.51□□□□□ -1.37
SUB1-204ENST00000504016 EMC9Q9Y3B6 208 aa6.51□□□□□ -1.37
SUB1-204ENST00000504016 DUSP10Q9Y6W6 482 aa6.51□□□□□ -1.37
SUB1-204ENST00000504016 CYP2C8P10632 490 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 NAT2P11245 290 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 ARID5AQ03989 594 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 ZXDCQ2QGD7 858 aaPredicted RBP6.5□□□□□ -1.37
SUB1-204ENST00000504016 DCP2Q8IU60 420 aaKnown RBP6.5□□□□□ -1.37
SUB1-204ENST00000504016 ZNF513Q8N8E2 541 aaPredicted RBP6.5□□□□□ -1.37
SUB1-204ENST00000504016 BVESQ8NE79 360 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 PLEKHO2Q8TD55 490 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 COPS5Q92905 334 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 PPP1R14AQ96A00 147 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 SEC16BQ96JE7 1060 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 MMP19Q99542 508 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 LNPKQ9C0E8 428 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 AP5M1Q9H0R1 490 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 PALD1Q9ULE6 856 aa6.5□□□□□ -1.37
SUB1-204ENST00000504016 INSRRP14616 1297 aa6.49□□□□□ -1.37
SUB1-204ENST00000504016 ZNF827Q17R98 1081 aa6.49□□□□□ -1.37
SUB1-204ENST00000504016 HHIPL2Q6UWX4 724 aa6.49□□□□□ -1.37
SUB1-204ENST00000504016 ZNF761Q86XN6 746 aaPredicted RBP6.49□□□□□ -1.37
SUB1-204ENST00000504016 FAM169BQ8N8A8 192 aa6.49□□□□□ -1.37
SUB1-204ENST00000504016 GPR20Q99678 358 aa6.49□□□□□ -1.37
SUB1-204ENST00000504016 THBDP07204 575 aa6.48□□□□□ -1.37
SUB1-204ENST00000504016 C8BP07358 591 aa6.48□□□□□ -1.37
SUB1-204ENST00000504016 ETFBP38117 255 aa6.48□□□□□ -1.37
SUB1-204ENST00000504016 ZC3H6P61129 1189 aaKnown RBP6.48□□□□□ -1.37
SUB1-204ENST00000504016 MBLAC2Q68D91 279 aa6.48□□□□□ -1.37
SUB1-204ENST00000504016 ETV3LQ6ZN32 361 aa6.48□□□□□ -1.37
SUB1-204ENST00000504016 TEX2Q8IWB9 1127 aa6.48□□□□□ -1.37
SUB1-204ENST00000504016 LINC00482Q8N8I6 264 aa6.48□□□□□ -1.37
SUB1-204ENST00000504016 DPF3Q92784 378 aa6.48□□□□□ -1.37
SUB1-204ENST00000504016 GORASP1Q9BQQ3 440 aa6.48□□□□□ -1.37
SUB1-204ENST00000504016 PCDH18Q9HCL0 1135 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms