RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 FLAD1Q8NFF5 587 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 TBCKQ8TEA7 893 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 LARP4BQ92615 738 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 SYN2Q92777 582 aaPredicted RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CUL5Q93034 780 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 MKL1Q969V6 931 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 MTMR8Q96EF0 704 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 CDK5RAP3Q96JB5 506 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 PIGSQ96S52 555 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 TSG101Q99816 390 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 DUSP9Q99956 384 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 DESI2Q9BSY9 194 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 MMTAG2Q9BU76 263 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 PARD6BQ9BYG5 372 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 UBXN6Q9BZV1 441 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 TTYH3Q9C0H2 523 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 DHX36Q9H2U1 1008 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 VIPAS39Q9H9C1 493 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 LUC7LQ9NQ29 371 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 LZTFL1Q9NQ48 299 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 SAP30BPQ9UHR5 308 aaKnown RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 SERPINB13Q9UIV8 391 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 PRDM4Q9UKN5 801 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 TRPC5Q9UL62 973 aaPredicted RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 MYO6Q9UM54 1294 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 PLAGL2Q9UPG8 496 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 GDAQ9Y2T3 454 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 NRXN2Q9P2S2 1712 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 MYH8P13535 1937 aa4.34□□□□□ -1.71
ALYREF-201ENST00000504015 GREB1LQ9C091 1923 aaPredicted RBP4.34□□□□□ -1.71
ALYREF-201ENST00000504015 COL2A1P02458 1487 aaPredicted RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PITPNM2Q9BZ72 1349 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CYP3A7-CYP3A51PA0A087WV96 503 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 SSU72P8A0A1W2PR75 194 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 TARSL2A2RTX5 802 aaKnown RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PP2D1A8MPX8 630 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 USP17L5A8MUK1 530 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 C6orf229H3BNL8 230 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 MAP2K7O14733 419 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PPEF1O14829 653 aaPredicted RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 ZBTB5O15062 677 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 ADAMTS3O15072 1205 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CLSTN1O94985 981 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 TBC1D8O95759 1140 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 FOSP01100 380 aaPredicted RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 GOLGA8HP0CJ92 632 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 NPR1P16066 1061 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CYP3A7P24462 503 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CDC25AP30304 524 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PDE6BP35913 854 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 TXKP42681 527 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PLA2G4AP47712 749 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 VAV2P52735 878 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 MARSP56192 900 aaKnown RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 GTF2IP78347 998 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 FKBP3Q00688 224 aaKnown RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 AMPD2Q01433 879 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 EVX2Q03828 476 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 EHHADHQ08426 723 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 STK4Q13043 487 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 GRB10Q13322 594 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 AP3B2Q13367 1082 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 SMC1AQ14683 1233 aaKnown RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 GRIK5Q16478 980 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 TMEM119Q4V9L6 283 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CCDC122Q5T0U0 273 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 ANKRD40Q6AI12 368 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CCDC70Q6NSX1 233 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PPP4R3CPQ6ZMV5 832 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 ZNF771Q7L3S4 317 aaPredicted RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PTF1AQ7RTS3 328 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 TRAPPC11Q7Z392 1133 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 ZNF572Q7Z3I7 529 aaPredicted RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 KIAA1328Q86T90 577 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CCDC65Q8IXS2 484 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 SLFN12Q8IYM2 578 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 RNF10Q8N5U6 811 aaKnown RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 SLC44A5Q8NCS7 719 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 LRRN4CLQ8ND94 238 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 TRIM58Q8NG06 486 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 RASGRP4Q8TDF6 673 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 DCAF4Q8WV16 495 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 RAD54LQ92698 747 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 TEKT1Q969V4 418 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PKNOX2Q96KN3 472 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CNOT6LQ96LI5 555 aaKnown RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CCDC42Q96M95 316 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 CEP63Q96MT8 703 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 ZDHHC15Q96MV8 337 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 MBOAT7Q96N66 472 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PURBQ96QR8 312 aaKnown RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 NOC4LQ9BVI4 516 aaKnown RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 FUT8Q9BYC5 575 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 NDST4Q9H3R1 872 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 KANSL2Q9H9L4 492 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 NHEJ1Q9H9Q4 299 aaPredicted RBP4.33□□□□□ -1.72
ALYREF-201ENST00000504015 JMJD4Q9H9V9 463 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 PSD3Q9NYI0 1048 aa4.33□□□□□ -1.72
ALYREF-201ENST00000504015 NYAP2Q9P242 653 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms