RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 PRPF4BQ13523 1007 aaKnown RBP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 MTMR3Q13615 1198 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 GSTA3Q16772 222 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 IMMTQ16891 758 aaKnown RBP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 SPRED3Q2MJR0 410 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 WASHC2DQ5SRD0 308 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 ANO1Q5XXA6 986 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 TSHZ3Q63HK5 1081 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 TRPM8Q7Z2W7 1104 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 RSPH3Q86UC2 560 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 PNMA8AQ86V59 439 aaPredicted RBP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 CREG2Q8IUH2 290 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 CCDC65Q8IXS2 484 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 SPATA4Q8NEY3 305 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 SPATA20Q8TB22 786 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 CAGE1Q8TC20 777 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 FBF1Q8TES7 1133 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 PMM1Q92871 262 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 FAM136AQ96C01 138 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 LRRC45Q96CN5 670 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 PBKQ96KB5 322 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 SCYL1Q96KG9 808 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 TMEM237Q96Q45 408 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 NR1H4Q96RI1 486 aaPredicted RBP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 NSRP1Q9H0G5 558 aaKnown RBP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 SIL1Q9H173 461 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 RABEP2Q9H5N1 569 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 PPANQ9NQ55 473 aaKnown RBP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 DDX21Q9NR30 783 aaKnown RBP eCLIP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 ABHD10Q9NUJ1 306 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 ZNHIT6Q9NWK9 470 aaKnown RBP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 RMND1Q9NWS8 449 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 ADAM22Q9P0K1 906 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 LIMA1Q9UHB6 759 aaKnown RBP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 SNX12Q9UMY4 172 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 LRCH1Q9Y2L9 728 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 NR2E3Q9Y5X4 410 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 CACNA1FO60840 1977 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 POGZQ7Z3K3 1410 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 CEP170BQ9Y4F5 1589 aaPredicted RBP6.56□□□□□ -1.36
LINC01340-201ENST00000504012 TMEM94Q12767 1356 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 TSPOAP1O95153 1857 aa6.56□□□□□ -1.36
LINC01340-201ENST00000504012 NEXMIFQ5QGS0 1516 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 KIF1BO60333 1816 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 MROH7Q68CQ1 1323 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 ADGRF5Q8IZF2 1346 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 A0A0G2JS52 829 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 A0A1B0GVG6 124 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 PTPDC1A2A3K4 754 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 GRID2IPA4D2P6 1211 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 SPDYE5A6NIY4 337 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 TMEM110-MUSTN1A8MSY1 372 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 BHMG1C9JSJ3 638 aaPredicted RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 H0YGN5 161 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 PDE2AO00408 941 aaPredicted RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 IPO5O00410 1097 aaKnown RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 TBC1D12O60347 775 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 ATP1A1P05023 1023 aaKnown RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 IL13P35225 146 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 PCK1P35558 622 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 CYLC1P35663 651 aaPredicted RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 MSH2P43246 934 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 MAGEA10P43363 369 aaPredicted RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 TRPC1P48995 793 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 FOSBP53539 338 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 POLE2P56282 527 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 NCALDP61601 193 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 ERVK-24P63145 666 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 CEBPZQ03701 1054 aaKnown RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 BNIP1Q12981 228 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 ITGA9Q13797 1035 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 KPNB1Q14974 876 aaKnown RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 QPCTQ16769 361 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 TMEM259Q4ZIN3 620 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 DAB2IPQ5VWQ8 1189 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 TBC1D9BQ66K14 1250 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 KLC3Q6P597 504 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 TMEM154Q6P9G4 183 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 C3orf62Q6ZUJ4 267 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 NCCRP1Q6ZVX7 275 aaPredicted RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 ASRGL1Q7L266 308 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 TBC1D1Q86TI0 1168 aaPredicted RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 ZNF554Q86TJ5 538 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 TMEM110Q86TL2 294 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 IQCF2Q8IXL9 164 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 SH2D3CQ8N5H7 860 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 KRI1Q8N9T8 703 aaKnown RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 ATP11CQ8NB49 1132 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 RBBP8NLQ8NC74 664 aaPredicted RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 SPIRE2Q8WWL2 714 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 KCNN1Q92952 543 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 RRP36Q96EU6 259 aaKnown RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 LTV1Q96GA3 475 aaPredicted RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 C8orf76Q96K31 380 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 PHACTR3Q96KR7 559 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 CCDC43Q96MW1 224 aaKnown RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 CATSPER2Q96P56 530 aa6.55□□□□□ -1.36
LINC01340-201ENST00000504012 ZNF317Q96PQ6 595 aaPredicted RBP6.55□□□□□ -1.36
LINC01340-201ENST00000504012 XPO6Q96QU8 1125 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms