RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 ATP4AP20648 1035 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 ELF3P78545 371 aaPredicted RBP6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 AMPD2Q01433 879 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 CHRNDQ07001 517 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 C2orf54Q08AI8 447 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 PNOCQ13519 176 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 TRADDQ15628 312 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 CCDC178Q5BJE1 867 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 SPECC1Q5M775 1068 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 TRAPPC3LQ5T215 181 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 RCSD1Q6JBY9 416 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 SLC30A9Q6PML9 568 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 MYCBPAPQ8TBZ2 947 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 AGAP11Q8TF27 550 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 FAM161BQ96MY7 647 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 ZKSCAN3Q9BRR0 538 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 TINF2Q9BSI4 451 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 ARMT1Q9H993 441 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 PPANQ9NQ55 473 aaKnown RBP6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 INCENPQ9NQS7 918 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 GGT7Q9UJ14 662 aa6.4□□□□□ -1.38
SOX2-OT-218ENST00000498731 CAMTA2O94983 1202 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 EZRP15311 586 aaKnown RBP6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 SCTRP47872 440 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 FMR1Q06787 632 aaKnown RBP eCLIP6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 PDIA5Q14554 519 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 PUM3Q15397 648 aaKnown RBP6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 ENOX2Q16206 610 aaKnown RBP6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLC15A2Q16348 729 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 ANKRD20A8PQ5CZ79 823 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 SYCP2LQ5T4T6 812 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 RNF220Q5VTB9 566 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 FOXB2Q5VYV0 432 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 NUGGCQ68CJ6 796 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 MSL3Q8N5Y2 521 aaKnown RBP6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 RBM41Q96IZ5 413 aaKnown RBP6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 NAPBQ9H115 298 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 PIH1D3Q9NQM4 214 aaKnown RBP6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 PRKAG2Q9UGJ0 569 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 MAST3O60307 1309 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZNF532Q9HCE3 1301 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 MYH13Q9UKX3 1938 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 CACNA1FO60840 1977 aa6.4□□□□□ -1.39
SOX2-OT-218ENST00000498731 CTAGE15A4D2H0 777 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZSCAN5CA6NGD5 496 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 PRSS47A8MTI9 375 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 G3V3G9 751 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 BUB1BO60566 1050 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 MBD4O95243 580 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ATP1A1P05023 1023 aaKnown RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 FESP07332 822 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CTAGE8P0CG41 777 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CYP7A1P22680 504 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 RPS6KB1P23443 525 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CTCFP49711 727 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 USP14P54578 494 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 KRT32Q14532 448 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 MYBPC3Q14896 1274 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 PARP10Q53GL7 1025 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 TPTE2Q6XPS3 522 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 C3orf67Q6ZVT6 689 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZNF467Q7Z7K2 595 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CTAGE6Q86UF2 777 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 TRIM42Q8IWZ5 723 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CTAGE4Q8IX94 777 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 TCP11Q8WWU5 503 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CELF1Q92879 486 aaKnown RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 SPAG5Q96R06 1193 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 MMTAG2Q9BU76 263 aaKnown RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 EBF2Q9HAK2 575 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 C15orf41Q9Y2V0 281 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 KDM3BQ7LBC6 1761 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 MYH15Q9Y2K3 1946 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 A6NHS1 94 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ERVV-1B6SEH8 477 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 MGRN1O60291 552 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CTDNEP1O95476 244 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 TMOD1P28289 359 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ARHGAP25P42331 645 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLC8A3P57103 927 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 AMPD3Q01432 767 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CCDC15Q0P6D6 951 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 TRIM28Q13263 835 aaKnown RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CAVIN4Q5BKX8 364 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 WDR93Q6P2C0 686 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CCDC50Q8IVM0 306 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZNF34Q8IZ26 560 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 STK32AQ8WU08 396 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 LPIN2Q92539 896 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 BICD1Q96G01 975 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 C8orf76Q96K31 380 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 SYT15Q9BQS2 421 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 IER2Q9BTL4 223 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 PREBQ9HCU5 417 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 SLC5A4Q9NY91 659 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 ZMYND8Q9ULU4 1186 aaPredicted RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 COL15A1P39059 1388 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 CIAO1O76071 339 aa6.39□□□□□ -1.39
SOX2-OT-218ENST00000498731 FGAP02671 866 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms