RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 KINO60870 393 aaKnown RBP6.02□□□□□ -1.45
CSTF1-207ENST00000498689 DUSP11O75319 330 aaKnown RBP6.02□□□□□ -1.45
CSTF1-207ENST00000498689 BAIAP3O94812 1187 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 GJA9P57773 515 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 PICALMQ13492 652 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 ZYXQ15942 572 aaKnown RBP6.02□□□□□ -1.45
CSTF1-207ENST00000498689 TMEM192Q8IY95 271 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 SUSD6Q92537 303 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 ZNF516Q92618 1163 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 TATDN2Q93075 761 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 ZNF594Q96JF6 807 aaPredicted RBP6.02□□□□□ -1.45
CSTF1-207ENST00000498689 UPF3AQ9H1J1 476 aaKnown RBP6.02□□□□□ -1.45
CSTF1-207ENST00000498689 AS3MTQ9HBK9 375 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 ERVK-5Q9HDB9 667 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 NRBP1Q9UHY1 535 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 SMG5Q9UPR3 1016 aaKnown RBP6.02□□□□□ -1.45
CSTF1-207ENST00000498689 TSC2P49815 1807 aa6.02□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L10C9JJH3 530 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 ENTPD3O75355 529 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 SNAI1O95863 264 aaPredicted RBP6.01□□□□□ -1.45
CSTF1-207ENST00000498689 IGKV5-2P06315 115 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 FOXC1Q12948 553 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 CAMK1Q14012 370 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 SPECC1Q5M775 1068 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSTF1-207ENST00000498689 CATSPERGQ6ZRH7 1159 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSTF1-207ENST00000498689 TBC1D22AQ8WUA7 517 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 RTP3Q9BQQ7 232 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 IDI2Q9BXS1 227 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 TBC1D2Q9BYX2 928 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 ALDH8A1Q9H2A2 487 aaPredicted RBP6.01□□□□□ -1.45
CSTF1-207ENST00000498689 TSHZ2Q9NRE2 1034 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 LCTP09848 1927 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 MYH8P13535 1937 aa6.01□□□□□ -1.45
CSTF1-207ENST00000498689 MYO5AQ9Y4I1 1855 aaKnown RBP6□□□□□ -1.45
CSTF1-207ENST00000498689 COL6A6A6NMZ7 2263 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 MYH15Q9Y2K3 1946 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 C2CD4DB7Z1M9 353 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L15C9J2P7 530 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 C19orf81C9J6K1 198 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L13C9JLJ4 530 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L11C9JVI0 530 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L18D6R9N7 530 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L22D6RA61 530 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L17D6RBQ6 530 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L19D6RCP7 530 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L20D6RJB6 530 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 NRG2O14511 850 aaPredicted RBP6□□□□□ -1.45
CSTF1-207ENST00000498689 TM4SF5O14894 197 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 DCNP07585 359 aaKnown RBP6□□□□□ -1.45
CSTF1-207ENST00000498689 ATF7P17544 494 aaPredicted RBP6□□□□□ -1.45
CSTF1-207ENST00000498689 RFC2P35250 354 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 USP17L24Q0WX57 530 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 LPAL2Q16609 132 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 ZNF792Q3KQV3 632 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 LBX2Q6XYB7 198 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 NUDT18Q6ZVK8 323 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 FBXO33Q7Z6M2 555 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 FBXO11Q86XK2 927 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 SIX5Q8N196 739 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 VN1R2Q8NFZ6 395 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 APOL5Q9BWW9 433 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 SPATC1LQ9H0A9 340 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 CDHR5Q9HBB8 845 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 EIF4ENIF1Q9NRA8 985 aaKnown RBP6□□□□□ -1.45
CSTF1-207ENST00000498689 ZHX1Q9UKY1 873 aaPredicted RBP6□□□□□ -1.45
CSTF1-207ENST00000498689 FAM184BQ9ULE4 1060 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 INSL6Q9Y581 213 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 DNHD1Q96M86 4753 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 CELSR1Q9NYQ6 3014 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 CACNA1DQ01668 2161 aa6□□□□□ -1.45
CSTF1-207ENST00000498689 LOXHD1Q8IVV2 1947 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 SPENQ96T58 3664 aaKnown RBP5.99□□□□□ -1.45
CSTF1-207ENST00000498689 CRYBG3Q68DQ2 2970 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.99□□□□□ -1.45
CSTF1-207ENST00000498689 LGR5O75473 907 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 GDF11O95390 407 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 CSF1RP07333 972 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 DNAJB1P25685 340 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 PRDX5P30044 214 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 COPS2P61201 443 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 HTRA4P83105 476 aaPredicted RBP5.99□□□□□ -1.45
CSTF1-207ENST00000498689 NFE2L2Q16236 605 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 CCDC144BQ3MJ40 725 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 UBE3BQ7Z3V4 1068 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 ZNF605Q86T29 641 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 RBM23Q86U06 439 aaKnown RBP5.99□□□□□ -1.45
CSTF1-207ENST00000498689 NCAPG2Q86XI2 1143 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 C1orf210Q8IVY1 113 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 EFHBQ8N7U6 833 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 SLC5A4Q9NY91 659 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 DLGAP2Q9P1A6 1054 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 TIMELESSQ9UNS1 1208 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 URB1O60287 2271 aaKnown RBP5.99□□□□□ -1.45
CSTF1-207ENST00000498689 MROH5Q6ZUA9 1318 aa5.99□□□□□ -1.45
CSTF1-207ENST00000498689 CACNA1FO60840 1977 aa5.98□□□□□ -1.45
CSTF1-207ENST00000498689 PCNX2A6NKB5 2137 aa5.98□□□□□ -1.45
CSTF1-207ENST00000498689 ANKRD18BA2A2Z9 1011 aa5.98□□□□□ -1.45
CSTF1-207ENST00000498689 J3QKU1 62 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms