RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	USP26	Q9BXU7	913 aa		12.15	□□□□□ -0.46
FXR1-222	ENST00000498658	WDR11	Q9BZH6	1224 aa		12.15	□□□□□ -0.46
FXR1-222	ENST00000498658	GNE	Q9Y223	722 aa	Known RBP	12.15	□□□□□ -0.46
FXR1-222	ENST00000498658	LCT	P09848	1927 aa		12.15	□□□□□ -0.46
FXR1-222	ENST00000498658	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.15	□□□□□ -0.47
FXR1-222	ENST00000498658	ELP1	O95163	1332 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	CEP290	O15078	2479 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	KLF18	A0A0U1RQI7	1052 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	EIF3J	O75822	258 aa	Known RBP	12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	CABYR	O75952	493 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	SMPD1	P17405	629 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	RXRA	P19793	462 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	CAST	P20810	708 aa	Known RBP	12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	RPS6KB1	P23443	525 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	FXR2	P51116	673 aa	Known RBP eCLIP	12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	TTLL4	Q14679	1199 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	SNX17	Q15036	470 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	KCNA10	Q16322	511 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	RTN1	Q16799	776 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	SLC35G1	Q2M3R5	365 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	TMTC3	Q6ZXV5	915 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	TLK2	Q86UE8	772 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	SRBD1	Q8N5C6	995 aa	Known RBP	12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	TBC1D5	Q92609	795 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	CUL5	Q93034	780 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	TAAR1	Q96RJ0	339 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	SEZ6L	Q9BYH1	1024 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	TM6SF1	Q9BZW5	370 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	STARD7	Q9NQZ5	370 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	PRKAG2	Q9UGJ0	569 aa		12.14	□□□□□ -0.47
FXR1-222	ENST00000498658	MROH7	Q68CQ1	1323 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.13	□□□□□ -0.47
FXR1-222	ENST00000498658		A0A1W2PQ45	241 aa	Predicted RBP	12.13	□□□□□ -0.47
FXR1-222	ENST00000498658		A0A1W2PQY0	241 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	OPLAH	O14841	1288 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	PLEKHA8P1	O95397	391 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	CPT1A	P50416	773 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	ATN1	P54259	1190 aa	Predicted RBP	12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	COL9A3	Q14050	684 aa	Predicted RBP	12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	FSCN1	Q16658	493 aa	Known RBP	12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	CCSAP	Q6IQ19	270 aa	Predicted RBP	12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	KCNV1	Q6PIU1	500 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658		Q6ZUG5	572 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	PIBF1	Q8WXW3	757 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	FERMT2	Q96AC1	680 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	LENG1	Q96BZ8	264 aa	Predicted RBP	12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	TCEANC2	Q96MN5	208 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	PXMP2	Q9NR77	195 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	PDGFC	Q9NRA1	345 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	COL20A1	Q9P218	1284 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	RBM27	Q9P2N5	1060 aa	Known RBP	12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	BRPF3	Q9ULD4	1205 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	CYP46A1	Q9Y6A2	500 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	LRRC37A2	A6NM11	1700 aa		12.13	□□□□□ -0.47
FXR1-222	ENST00000498658	ALPK3	Q96L96	1907 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	GOLGA8A	A7E2F4	631 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	GOLGA8B	A8MQT2	603 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	hCG_1984214	I3L0E3	225 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	PIK3CD	O00329	1044 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	DYNC1LI2	O43237	492 aa	Predicted RBP	12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	ADCY6	O43306	1168 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	KPNA6	O60684	536 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	STAM2	O75886	525 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	ASGR1	P07306	291 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	NR3C2	P08235	984 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	EIF2AK2	P19525	551 aa	Known RBP	12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	METAP2	P50579	478 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	RTP1	P59025	263 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	RUFY3	Q7L099	469 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	ZNF713	Q8N859	430 aa	Predicted RBP	12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	SMARCC2	Q8TAQ2	1214 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	BRF1	Q92994	677 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	VTI1A	Q96AJ9	217 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	TOX2	Q96NM4	488 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	AGXT2	Q9BYV1	514 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	ZSWIM6	Q9HCJ5	1215 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	POLR3E	Q9NVU0	708 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.12	□□□□□ -0.47
FXR1-222	ENST00000498658	ATP11B	Q9Y2G3	1177 aa		12.12	□□□□□ -0.47
FXR1-222	ENST00000498658		A0A0U1RQG5	324 aa	Predicted RBP	12.11	□□□□□ -0.47
FXR1-222	ENST00000498658		A0A1W2PPC1	479 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	TXN	P10599	105 aa	Known RBP	12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	TGFB3	P10600	412 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	HOXA13	P31271	388 aa	Predicted RBP	12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	ANAPC15	P60006	121 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	PPP1R18	Q6NYC8	613 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	XRRA1	Q6P2D8	792 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	VSIG10L	Q86VR7	867 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	RAB11FIP4	Q86YS3	637 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	CMTR1	Q8N1G2	835 aa	Known RBP	12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	CCDC82	Q8N4S0	544 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	OR6J1	Q8NGC5	347 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	PDCD2L	Q9BRP1	358 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	GLT8D2	Q9H1C3	349 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	PSTPIP2	Q9H939	334 aa		12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	DDX49	Q9Y6V7	483 aa	Known RBP	12.11	□□□□□ -0.47
FXR1-222	ENST00000498658	NID2	Q14112	1375 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	MYADML2	A6NDP7	307 aa		12.1	□□□□□ -0.47
FXR1-222	ENST00000498658	DCDC2C	A8MYV0	355 aa		12.1	□□□□□ -0.47

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