RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 PTPN11Q06124 597 aaPredicted RBP16.45■□□□□ 0.22
CCDC58-207ENST00000498466 SYDE2Q5VT97 1194 aa16.45■□□□□ 0.22
CCDC58-207ENST00000498466 SLC30A10Q6XR72 485 aa16.45■□□□□ 0.22
CCDC58-207ENST00000498466 SCFD2Q8WU76 684 aa16.45■□□□□ 0.22
CCDC58-207ENST00000498466 COPS5Q92905 334 aa16.45■□□□□ 0.22
CCDC58-207ENST00000498466 PRRC2BQ5JSZ5 2229 aaKnown RBP16.45■□□□□ 0.22
CCDC58-207ENST00000498466 A6NJR5 290 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 ZMYM1Q5SVZ6 1142 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 BTNL9Q6UXG8 535 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 RNF207Q6ZRF8 634 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 SPRED2Q7Z698 418 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 ZBED2Q9BTP6 218 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 DCTPP1Q9H773 170 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 GPCPD1Q9NPB8 672 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 SCN5AQ14524 2016 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 LCTP09848 1927 aa16.44■□□□□ 0.22
CCDC58-207ENST00000498466 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
CCDC58-207ENST00000498466 LPXNO60711 386 aa16.43■□□□□ 0.22
CCDC58-207ENST00000498466 TXNP10599 105 aaKnown RBP16.43■□□□□ 0.22
CCDC58-207ENST00000498466 PTGISQ16647 500 aa16.43■□□□□ 0.22
CCDC58-207ENST00000498466 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
CCDC58-207ENST00000498466 CCDC155Q8N6L0 562 aa16.43■□□□□ 0.22
CCDC58-207ENST00000498466 CLEC4DQ8WXI8 215 aa16.43■□□□□ 0.22
CCDC58-207ENST00000498466 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
CCDC58-207ENST00000498466 TTC41PQ6P2S7 1318 aa16.43■□□□□ 0.22
CCDC58-207ENST00000498466 LCHNA4D1U4 455 aa16.42■□□□□ 0.22
CCDC58-207ENST00000498466 FAM86C2PA6NEL3 165 aa16.42■□□□□ 0.22
CCDC58-207ENST00000498466 NOVP48745 357 aa16.42■□□□□ 0.22
CCDC58-207ENST00000498466 WDR5P61964 334 aaKnown RBP16.42■□□□□ 0.22
CCDC58-207ENST00000498466 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
CCDC58-207ENST00000498466 TMCO2Q7Z6W1 182 aaPredicted RBP16.42■□□□□ 0.22
CCDC58-207ENST00000498466 CAGE1Q8TC20 777 aa16.42■□□□□ 0.22
CCDC58-207ENST00000498466 AFAP1L1Q8TED9 768 aa16.42■□□□□ 0.22
CCDC58-207ENST00000498466 GDPD5Q8WTR4 605 aa16.42■□□□□ 0.22
CCDC58-207ENST00000498466 KHSRPQ92945 711 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC58-207ENST00000498466 B4DLN1 442 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 FOXP2O15409 715 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 GPR37L1O60883 481 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 TOP1P11387 765 aaKnown RBP16.41■□□□□ 0.22
CCDC58-207ENST00000498466 EDNRBP24530 442 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 MRPL12P52815 198 aaKnown RBP16.41■□□□□ 0.22
CCDC58-207ENST00000498466 DNERQ8NFT8 737 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 PI4K2BQ8TCG2 481 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 TMEM47Q9BQJ4 181 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 LMCD1Q9NZU5 365 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 ANAPC4Q9UJX5 808 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 RCAN3Q9UKA8 241 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 PNMA2Q9UL42 364 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 MTUS1Q9ULD2 1270 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 TANC1Q9C0D5 1861 aa16.41■□□□□ 0.22
CCDC58-207ENST00000498466 SCN10AQ9Y5Y9 1956 aa16.4■□□□□ 0.22
CCDC58-207ENST00000498466 ORC4O43929 436 aa16.4■□□□□ 0.22
CCDC58-207ENST00000498466 ARIH2O95376 493 aa16.4■□□□□ 0.22
CCDC58-207ENST00000498466 DEFB103AP81534 67 aa16.4■□□□□ 0.22
CCDC58-207ENST00000498466 RRP12Q5JTH9 1297 aaKnown RBP16.4■□□□□ 0.22
CCDC58-207ENST00000498466 GDF6Q6KF10 455 aaPredicted RBP16.4■□□□□ 0.22
CCDC58-207ENST00000498466 LRRC8DQ7L1W4 858 aa16.4■□□□□ 0.22
CCDC58-207ENST00000498466 MIER1Q8N108 512 aa16.4■□□□□ 0.22
CCDC58-207ENST00000498466 C11orf16Q9NQ32 467 aa16.4■□□□□ 0.22
CCDC58-207ENST00000498466 SELPP16109 830 aa16.39■□□□□ 0.21
CCDC58-207ENST00000498466 VPS53Q5VIR6 699 aa16.39■□□□□ 0.21
CCDC58-207ENST00000498466 CNKSR3Q6P9H4 555 aa16.39■□□□□ 0.21
CCDC58-207ENST00000498466 AFG1LQ8WV93 481 aa16.39■□□□□ 0.21
CCDC58-207ENST00000498466 COL4A4P53420 1690 aaPredicted RBP16.38■□□□□ 0.21
CCDC58-207ENST00000498466 PI4K2BG5E9Z4 385 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 PARNO95453 639 aaKnown RBP16.38■□□□□ 0.21
CCDC58-207ENST00000498466 MMP3P08254 477 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 PDHBP11177 359 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 GPNMBQ14956 572 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 SESTD1Q86VW0 696 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 OTUD7AQ8TE49 926 aaPredicted RBP16.38■□□□□ 0.21
CCDC58-207ENST00000498466 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
CCDC58-207ENST00000498466 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 RAD9AQ99638 391 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 UBE2ZQ9H832 354 aaPredicted RBP16.38■□□□□ 0.21
CCDC58-207ENST00000498466 SUGCTQ9HAC7 445 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 CD320Q9NPF0 282 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 WDR19Q8NEZ3 1342 aa16.38■□□□□ 0.21
CCDC58-207ENST00000498466 GJB5O95377 273 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 GH1P01241 217 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 FGRP09769 529 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 ZNF543Q08ER8 600 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 LY6KQ17RY6 165 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 USH1GQ495M9 461 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 SEPT14Q6ZU15 432 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 CHST3Q7LGC8 479 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 DHX38Q92620 1227 aaKnown RBP16.37■□□□□ 0.21
CCDC58-207ENST00000498466 CTAGE1Q96RT6 745 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 TCP11L1Q9NUJ3 509 aa16.37■□□□□ 0.21
CCDC58-207ENST00000498466 U3KPZ7 1027 aaPredicted RBP16.37■□□□□ 0.21
CCDC58-207ENST00000498466 ABHD14A-ACY1A0A1B0GW23 586 aa16.36■□□□□ 0.21
CCDC58-207ENST00000498466 NBNO60934 754 aa16.36■□□□□ 0.21
CCDC58-207ENST00000498466 CXCL10P02778 98 aa16.36■□□□□ 0.21
CCDC58-207ENST00000498466 CKBP12277 381 aa16.36■□□□□ 0.21
CCDC58-207ENST00000498466 MX1P20591 662 aa16.36■□□□□ 0.21
CCDC58-207ENST00000498466 CASTP20810 708 aaKnown RBP16.36■□□□□ 0.21
CCDC58-207ENST00000498466 ERVK-21P61565 698 aa16.36■□□□□ 0.21
CCDC58-207ENST00000498466 FAM117BQ6P1L5 589 aa16.36■□□□□ 0.21
CCDC58-207ENST00000498466 CCDC62Q6P9F0 684 aa16.36■□□□□ 0.21
CCDC58-207ENST00000498466 C7orf31Q8N865 590 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms