RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 NKRFO15226 690 aaKnown RBP eCLIP9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 CFBP00751 764 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 TIMP1P01033 207 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 TXNP10599 105 aaKnown RBP9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 CPT1AP50416 773 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 ANTXR2P58335 489 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 FPGSQ05932 587 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 TROAPQ12815 778 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 PPP2R5BQ15173 497 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 BMP2KLQ5H9B9 411 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 C9orf50Q5SZB4 431 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 CASC1Q6TDU7 716 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 CATIPQ7Z7H3 387 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 SKAP1Q86WV1 359 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 HOMER1Q86YM7 354 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 OR6J1Q8NGC5 347 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 SYTL5Q8TDW5 730 aaPredicted RBP9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 IGDCC4Q8TDY8 1250 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 NSUN6Q8TEA1 469 aaKnown RBP9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 SCFD2Q8WU76 684 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 TAAR1Q96RJ0 339 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 SEZ6LQ9BYH1 1024 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 RIOX1Q9H6W3 641 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 ANO2Q9NQ90 1003 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 POLR3EQ9NVU0 708 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 COL20A1Q9P218 1284 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 TBX21Q9UL17 535 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 PCDHA1Q9Y5I3 950 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 TANC1Q9C0D5 1861 aa9.85□□□□□ -0.83
HMGXB4-207ENST00000498212 SZT2Q5T011 3432 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 SCN5AQ14524 2016 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 SLC27A2O14975 620 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 PRC1O43663 620 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 PPP1R11O60927 126 aaPredicted RBP9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 CD4P01730 458 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 MCM5P33992 734 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 HSD17B4P51659 736 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 PSMC6P62333 389 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 TRAF1Q13077 416 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 TTLL4Q14679 1199 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 STXBP2Q15833 593 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 BRDTQ58F21 947 aaPredicted RBP9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 ARHGEF16Q5VV41 709 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 Q7L0L9 218 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 DEFB123Q8N688 67 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 SAMD3Q8N6K7 520 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 ZNF579Q8NAF0 562 aaKnown RBP9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 SLC43A3Q8NBI5 491 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 CTCFLQ8NI51 663 aaPredicted RBP9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 COPS5Q92905 334 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 PIGSQ96S52 555 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 IWS1Q96ST2 819 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 RMDN3Q96TC7 470 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 MTA3Q9BTC8 594 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 LY9Q9HBG7 655 aa9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 GPHNQ9NQX3 736 aaPredicted RBP9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 MAP3K20Q9NYL2 800 aaKnown RBP9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 TRIP12Q14669 1992 aaPredicted RBP9.84□□□□□ -0.83
HMGXB4-207ENST00000498212 GRIN2DO15399 1336 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 PNMA6FA0A0J9YX94 578 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 OPLAHO14841 1288 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 CYTH3O43739 400 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 B4GALT4O60513 344 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 DDAH1O94760 285 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 ARIH2O95376 493 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 MYL3P08590 195 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 EIF2AK2P19525 551 aaKnown RBP9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 EPHB4P54760 987 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 PURAQ00577 322 aaKnown RBP9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 GHRHRQ02643 423 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 NECTIN1Q15223 517 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 SLC35G1Q2M3R5 365 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 CREB3L3Q68CJ9 461 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 MFSD5Q6N075 450 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 NFXL1Q6ZNB6 911 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 SEPT14Q6ZU15 432 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 ZNF654Q8IZM8 581 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 TMTC2Q8N394 836 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 TMEM199Q8N511 208 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 TMEM87BQ96K49 555 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 RNPC3Q96LT9 517 aaKnown RBP9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 MAP3K14Q99558 947 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 PXMP2Q9NR77 195 aa9.83□□□□□ -0.84
HMGXB4-207ENST00000498212 CCDC69A6NI79 296 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 A6NJR5 290 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 SH2B2O14492 632 aaPredicted RBP9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 KPNA6O60684 536 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 NR3C2P08235 984 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 KIF5BP33176 963 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 PPIGQ13427 754 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 LY6KQ17RY6 165 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 RNF20Q5VTR2 975 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 CCDC62Q6P9F0 684 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 CCDC136Q96JN2 1154 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 MTG1Q9BT17 334 aaPredicted RBP9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 MYL10Q9BUA6 226 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 HIPK3Q9H422 1215 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 MTMR10Q9NXD2 777 aa9.82□□□□□ -0.84
HMGXB4-207ENST00000498212 LAMA3Q16787 3333 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms