RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 LAS1LQ9Y4W2 734 aaKnown RBP7.23□□□□□ -1.25
TMEM39A-212ENST00000497993 ABCC4O15439 1325 aa7.23□□□□□ -1.25
TMEM39A-212ENST00000497993 GLTPD2A6NH11 291 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 IGKV5-2P06315 115 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 CDKN1CP49918 316 aaPredicted RBP7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 KCNMA1Q12791 1236 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 PPP2R5AQ15172 486 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 NFE2Q16621 373 aaPredicted RBP7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 MTERF2Q49AM1 385 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 CEP135Q66GS9 1140 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 CHAC2Q8WUX2 184 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 ZNF622Q969S3 477 aaKnown RBP eCLIP7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 TRIM11Q96F44 468 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 SHDQ96IW2 340 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 PLVAPQ9BX97 442 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 STK31Q9BXU1 1019 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 RASSF4Q9H2L5 321 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 ACTR10Q9NZ32 417 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 RNF181Q9P0P0 153 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 MCM8Q9UJA3 840 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 ATP6V0A2Q9Y487 856 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 THSD7BQ9C0I4 1608 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 KDM2BQ8NHM5 1336 aa7.22□□□□□ -1.25
TMEM39A-212ENST00000497993 FZD9O00144 591 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 TSPAN6O43657 245 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 BBOX1O75936 387 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 CASP7P55210 303 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 C1QTNF8P60827 252 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 ATP11AP98196 1134 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 APOBRQ0VD83 1088 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 AIMP1Q12904 312 aaKnown RBP7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 GRAPQ13588 217 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 BRD3Q15059 726 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 WFDC8Q8IUA0 241 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 FAM9BQ8IZU0 186 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 SAMD3Q8N6K7 520 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 CELF2-AS1Q8N7Q2 184 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 TMEM102Q8N9M5 508 aaPredicted RBP7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 GRAPLQ8TC17 118 aaPredicted RBP7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 RBM17Q96I25 401 aaKnown RBP7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 OSMRQ99650 979 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 MUC3BQ9H195 1237 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 SUV39H2Q9H5I1 410 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 NPHS2Q9NP85 383 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 TRMT112Q9UI30 125 aaKnown RBP7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 PPM1HQ9ULR3 514 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 MAPK8IP1Q9UQF2 711 aa7.21□□□□□ -1.26
TMEM39A-212ENST00000497993 PI4KAP2A4QPH2 592 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 PDE2AO00408 941 aaPredicted RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 NPHP1O15259 732 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 PDE8AO60658 829 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 WDHD1O75717 1129 aaPredicted RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 ALDH1L1O75891 902 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 POLR3DP05423 398 aaPredicted RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 MYL1P05976 194 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 EIF6P56537 245 aaKnown RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 EXOSC9Q06265 439 aaKnown RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 ZRSR2Q15696 482 aaKnown RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 FXNQ16595 210 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 CT47A1Q5JQC4 288 aaPredicted RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 KIAA0319Q5VV43 1072 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 PEAR1Q5VY43 1037 aaPredicted RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 GDF6Q6KF10 455 aaPredicted RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 FBXL19Q6PCT2 694 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 G2E3Q7L622 706 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 C11orf96Q7Z7L8 435 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 JAMLQ86YT9 394 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 SP8Q8IXZ3 490 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 DTWD1Q8N5C7 304 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 PI4KAP1Q8N8J0 262 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 LINS1Q8NG48 757 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 OR6P1Q8NGX9 317 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 DNAAF4Q8WXU2 420 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 RPGRQ92834 1020 aaKnown RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 NKD1Q969G9 470 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 SCYL1Q96KG9 808 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 CRBNQ96SW2 442 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 POP1Q99575 1024 aaKnown RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 ZKSCAN3Q9BRR0 538 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 ST7Q9NRC1 585 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 GNL3LQ9NVN8 582 aaKnown RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 CWC25Q9NXE8 425 aaPredicted RBP7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 UTYO14607 1347 aa7.2□□□□□ -1.26
TMEM39A-212ENST00000497993 FAM177BA6PVY3 158 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 ELL2O00472 640 aaPredicted RBP7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 IRS4O14654 1257 aaPredicted RBP7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 GREM1O60565 184 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 TOMM70O94826 608 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 ASMTLO95671 621 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 PTPRAP18433 802 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 IARSP41252 1262 aaKnown RBP7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 FSTL1Q12841 308 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 ALDH1L2Q3SY69 923 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 PRRT3Q5FWE3 981 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 SNAP47Q5SQN1 464 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 DIEXFQ68CQ4 756 aaKnown RBP7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 PPP4R4Q6NUP7 873 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 SYNE4Q8N205 404 aa7.19□□□□□ -1.26
TMEM39A-212ENST00000497993 IL22RA1Q8N6P7 574 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms