RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 RWDD3Q9Y3V2 267 aa5.19□□□□□ -1.58
PSPC1-205ENST00000497722 TRBV23OR9-2A0A075B6M9 112 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 NPHP3-ACAD11A0A0J9YXS1 232 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 SMAD7O15105 426 aaKnown RBP5.18□□□□□ -1.58
PSPC1-205ENST00000497722 KCNH1O95259 989 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 FOXO4P98177 505 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 SCRN1Q12765 414 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 GTF2IRD2BQ6EKJ0 949 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 GTF2IRD2Q86UP8 949 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 NPLOC4Q8TAT6 608 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 FRS2Q8WU20 508 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 CPA5Q8WXQ8 436 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 LGR4Q9BXB1 951 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 NKX2-4Q9H2Z4 354 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 RXFP1Q9HBX9 757 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 GPRC5CQ9NQ84 441 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 CYP26B1Q9NR63 512 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 GULP1Q9UBP9 304 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 SUGT1Q9Y2Z0 365 aa5.18□□□□□ -1.58
PSPC1-205ENST00000497722 A0A1W2PQJ5 194 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 SH3D21A4FU49 640 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 THBDP07204 575 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 NCAM1P13591 858 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 PLS3P13797 630 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 PMLP29590 882 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 MC3RP41968 323 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 TESK1Q15569 626 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 INF2Q27J81 1249 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 POMZP3Q6PJE2 187 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 B3GNT8Q7Z7M8 397 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 SAPCD2Q86UD0 394 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 SYT8Q8NBV8 401 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 FEZF2Q8TBJ5 459 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 CLEC1BQ9P126 229 aa5.17□□□□□ -1.58
PSPC1-205ENST00000497722 TBX1O43435 398 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 SCG5P05408 212 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 FGRP09769 529 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 ETFBP38117 255 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 SLURP1P55000 103 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 EFEMP1Q12805 493 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 SLC9A5Q14940 896 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 WWC2Q6AWC2 1192 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 MRM1Q6IN84 353 aaKnown RBP5.16□□□□□ -1.58
PSPC1-205ENST00000497722 C6orf15Q6UXA7 325 aaPredicted RBP5.16□□□□□ -1.58
PSPC1-205ENST00000497722 CCDC103Q8IW40 242 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 SP8Q8IXZ3 490 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 Q8N1Y9 231 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 KREMEN2Q8NCW0 462 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 MICAL1Q8TDZ2 1067 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 PEX11GQ96HA9 241 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 TINF2Q9BSI4 451 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 BCAS3Q9H6U6 928 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 PPP1R1BQ9UD71 204 aaPredicted RBP5.16□□□□□ -1.58
PSPC1-205ENST00000497722 PRKAG3Q9UGI9 489 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 MRVI1Q9Y6F6 885 aa5.16□□□□□ -1.58
PSPC1-205ENST00000497722 B2RBV5 119 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 NPHS1O60500 1241 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 ZBTB7AO95365 584 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 NAT2P11245 290 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 ZC3H6P61129 1189 aaKnown RBP5.15□□□□□ -1.59
PSPC1-205ENST00000497722 PUM1Q14671 1186 aaKnown RBP eCLIP5.15□□□□□ -1.59
PSPC1-205ENST00000497722 LIPIQ6XZB0 460 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 FAM178BQ8IXR5 827 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 NLGN1Q8N2Q7 840 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 CRACR2BQ8N4Y2 399 aaPredicted RBP5.15□□□□□ -1.59
PSPC1-205ENST00000497722 ZNF526Q8TF50 670 aaPredicted RBP5.15□□□□□ -1.59
PSPC1-205ENST00000497722 ALG3Q92685 438 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 ACTR10Q9NZ32 417 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 TMEFF2Q9UIK5 374 aaPredicted RBP5.15□□□□□ -1.59
PSPC1-205ENST00000497722 MYRFQ9Y2G1 1151 aa5.15□□□□□ -1.59
PSPC1-205ENST00000497722 NTRK1P04629 796 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 ITGAVP06756 1048 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 DNAJA1P31689 397 aaKnown RBP5.14□□□□□ -1.59
PSPC1-205ENST00000497722 CACNB2Q08289 660 aaPredicted RBP5.14□□□□□ -1.59
PSPC1-205ENST00000497722 TNNI3KQ59H18 835 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 FRMD5Q7Z6J6 570 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 CABP7Q86V35 215 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 ZNF227Q86WZ6 799 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 ADGRG2Q8IZP9 1017 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 LINC00482Q8N8I6 264 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 BTN2A2Q8WVV5 523 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 TEPSINQ96N21 525 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 NOX5Q96PH1 765 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 SPATA6Q9NWH7 488 aaPredicted RBP5.14□□□□□ -1.59
PSPC1-205ENST00000497722 DBR1Q9UK59 544 aaKnown RBP5.14□□□□□ -1.59
PSPC1-205ENST00000497722 SIT1Q9Y3P8 196 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 PMF1-BGLAPU3KQ54 211 aa5.14□□□□□ -1.59
PSPC1-205ENST00000497722 A0A1B0GTL3 188 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 NOP56O00567 594 aaKnown RBP5.13□□□□□ -1.59
PSPC1-205ENST00000497722 SGSM2O43147 1006 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 SUSD5O60279 629 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 FUCA1P04066 466 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 SSBP05455 408 aaKnown RBP eCLIP5.13□□□□□ -1.59
PSPC1-205ENST00000497722 INSRRP14616 1297 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 HOXC12P31275 282 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 RBM10P98175 930 aaKnown RBP5.13□□□□□ -1.59
PSPC1-205ENST00000497722 SF1Q15637 639 aaKnown RBP5.13□□□□□ -1.59
PSPC1-205ENST00000497722 E4F1Q66K89 784 aaPredicted RBP5.13□□□□□ -1.59
PSPC1-205ENST00000497722 DENND5AQ6IQ26 1287 aa5.13□□□□□ -1.59
PSPC1-205ENST00000497722 NLRP10Q86W26 655 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms