RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 TIAM2Q8IVF5 1701 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 A0A0G2JS52 829 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 HSD17B3P37058 310 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 PEX19P40855 299 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 GUCY2FP51841 1108 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 FOXO4P98177 505 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 FKBP4Q02790 459 aaKnown RBP eCLIP14.33□□□□□ -0.12
VEGFA-215ENST00000497139 PPP2R5BQ15173 497 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 ALX1Q15699 326 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 SPDYCQ5MJ68 293 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 SLC30A9Q6PML9 568 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 CRACR2BQ8N4Y2 399 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-215ENST00000497139 SMCR8Q8TEV9 937 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-215ENST00000497139 MLXIPQ9HAP2 919 aa14.33□□□□□ -0.12
VEGFA-215ENST00000497139 B4E1Z4 1266 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 PSMA7O14818 248 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 GUCY1A2P33402 732 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 KIF11P52732 1056 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 ZNF844Q08AG5 666 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 ZNF570Q96NI8 536 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 TUBGCP2Q9BSJ2 902 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 KCNMB3Q9NPA1 279 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 PHF8Q9UPP1 1060 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 ZNF142P52746 1687 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-215ENST00000497139 ATP2C1P98194 919 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-215ENST00000497139 ERMARDQ5T6L9 678 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 ZSCAN29Q8IWY8 852 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-215ENST00000497139 ZBTB10Q96DT7 871 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 POLD4Q9HCU8 107 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 CWC25Q9NXE8 425 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-215ENST00000497139 SH3BP1Q9Y3L3 701 aa14.32□□□□□ -0.12
VEGFA-215ENST00000497139 RASSF10A6NK89 507 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 PPP1R2P41236 205 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 ODF2Q5BJF6 829 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 KLHDC7AQ5VTJ3 777 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 ARHGAP27Q6ZUM4 889 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 TMTC2Q8N394 836 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 DRAXINQ8NBI3 349 aaPredicted RBP14.31□□□□□ -0.12
VEGFA-215ENST00000497139 ZFAND2BQ8WV99 257 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 FAM129AQ9BZQ8 928 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 COL22A1Q8NFW1 1626 aaPredicted RBP14.31□□□□□ -0.12
VEGFA-215ENST00000497139 B4DLN1 442 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 BHMG1C9JSJ3 638 aaPredicted RBP14.31□□□□□ -0.12
VEGFA-215ENST00000497139 RTN3O95197 1032 aaPredicted RBP14.31□□□□□ -0.12
VEGFA-215ENST00000497139 CTNNA1P35221 906 aaKnown RBP14.31□□□□□ -0.12
VEGFA-215ENST00000497139 KRT2P35908 639 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 ROR2Q01974 943 aaKnown RBP14.31□□□□□ -0.12
VEGFA-215ENST00000497139 LRP10Q7Z4F1 713 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 DHTKD1Q96HY7 919 aaPredicted RBP14.31□□□□□ -0.12
VEGFA-215ENST00000497139 RNF26Q9BY78 433 aaPredicted RBP14.31□□□□□ -0.12
VEGFA-215ENST00000497139 CHD4Q14839 1912 aa14.31□□□□□ -0.12
VEGFA-215ENST00000497139 F8W031 263 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-215ENST00000497139 CXCR5P32302 372 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 MRPS25P82663 173 aaKnown RBP14.3□□□□□ -0.12
VEGFA-215ENST00000497139 CWF19L1Q69YN2 538 aaKnown RBP14.3□□□□□ -0.12
VEGFA-215ENST00000497139 TRIM47Q96LD4 638 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 KRT23Q9C075 422 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 BLZF1Q9H2G9 400 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 CAMTA1Q9Y6Y1 1673 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 AFF2P51816 1311 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 BICDL2A1A5D9 508 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 UBE2Q2LH0YL09 131 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 COBLO75128 1261 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 AP1G2O75843 785 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 ZNF131P52739 623 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 EIF3BP55884 814 aaKnown RBP14.3□□□□□ -0.12
VEGFA-215ENST00000497139 CMPK2Q5EBM0 449 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 FKBP15Q5T1M5 1219 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 FAM43BQ6ZT52 329 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-215ENST00000497139 PIGWQ7Z7B1 504 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 ANKLE2Q86XL3 938 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 OXER1Q8TDS5 423 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 AGAP11Q8TF27 550 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 XPO6Q96QU8 1125 aaKnown RBP14.3□□□□□ -0.12
VEGFA-215ENST00000497139 LUC7LQ9NQ29 371 aaKnown RBP14.3□□□□□ -0.12
VEGFA-215ENST00000497139 ZFATQ9P243 1243 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 PKD1L3Q7Z443 1732 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 KIF1AQ12756 1690 aa14.3□□□□□ -0.12
VEGFA-215ENST00000497139 STXBP3O00186 592 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 CLTAP09496 248 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 MYL6BP14649 208 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 TMOD1P28289 359 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 GCLCP48506 637 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-215ENST00000497139 TTI2Q6NXR4 508 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 GBP7Q8N8V2 638 aaPredicted RBP14.29□□□□□ -0.12
VEGFA-215ENST00000497139 MYL10Q9BUA6 226 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 SMARCAL1Q9NZC9 954 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 EHD2Q9NZN4 543 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 ARHGAP20Q9P2F6 1191 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 CEP126Q9P2H0 1117 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 TMEM59LQ9UK28 342 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 RGPD2P0DJD1 1756 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 MYH6P13533 1939 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 ESYT3A0FGR9 886 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 TTC36A6NLP5 189 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 ENO4A6NNW6 628 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 MAGEA1P43355 309 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 TRAPPC10P48553 1259 aa14.29□□□□□ -0.12
VEGFA-215ENST00000497139 PAPOLAP51003 745 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms