RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 EIF2B5Q13144 721 aaKnown RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 GNL2Q13823 731 aaKnown RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 LRP8Q14114 963 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 DDB1Q16531 1140 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC93Q567U6 631 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC178Q5BJE1 867 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 SV2BQ7L1I2 683 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 METTL16Q86W50 562 aaKnown RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 SPACA3Q8IXA5 215 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC191Q8NCU4 936 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 GABPB2Q8TAK5 448 aaPredicted RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 BAHD1Q8TBE0 780 aaPredicted RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 CDK5RAP3Q96JB5 506 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 C8orf48Q96LL4 319 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 NOC4LQ9BVI4 516 aaKnown RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 PDGFDQ9GZP0 370 aaPredicted RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 KCNK12Q9HB15 430 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 LZTS1Q9Y250 596 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 N6AMT1Q9Y5N5 214 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 ZBED9Q6R2W3 1325 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 IFRD1O00458 451 aaPredicted RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 MEIS1O00470 390 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 BPNT1O95861 308 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 MMEP08473 750 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 CD8BP10966 210 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 IL4RP24394 825 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 RWDD2BP57060 319 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 TOMM20Q15388 145 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 COBLL1Q53SF7 1204 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 ANKRD45Q5TZF3 282 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 TDRD10Q5VZ19 366 aaKnown RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 ZCCHC8Q6NZY4 707 aaKnown RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 KCNV1Q6PIU1 500 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 FAM196AQ6ZSG2 479 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 MYLK4Q86YV6 388 aaPredicted RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 PPM1EQ8WY54 764 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 MAP3K14Q99558 947 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 WNT10AQ9GZT5 417 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 TRPV5Q9NQA5 729 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 CHST12Q9NRB3 414 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 ATG3Q9NT62 314 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 EXOC1Q9NV70 894 aa3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 C6orf203Q9P0P8 240 aaPredicted RBP3.58□□□□□ -1.84
SNRNP48-202ENST00000496946 UQCRHLA0A096LP55 91 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 F8VZ95 297 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 H3BS24 57 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 CHL1O00533 1208 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 FANCGO15287 622 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 BBOX1O75936 387 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 KRT18P05783 430 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 UQCRHP07919 91 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 MYBL2P10244 700 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 SPINK2P20155 84 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 ST13P50502 369 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 GP2P55259 537 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 CBX1P83916 185 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 RPL6Q02878 288 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC4A8Q2Y0W8 1093 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 AGAP9Q5VTM2 703 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 ARMC3Q5W041 872 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 SUGP1Q8IWZ8 645 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 CHPFQ8IZ52 775 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 Q96M66 194 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 UIMC1Q96RL1 719 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 SPON2Q9BUD6 331 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 TRIM7Q9C029 511 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 NACA2Q9H009 215 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 RPAP3Q9H6T3 665 aaPredicted RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 DCAF16Q9NXF7 216 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 CLIP2Q9UDT6 1046 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 ASAP1Q9ULH1 1129 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 PCDHB10Q9UN67 800 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 SMARCA2P51531 1590 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 GIPC1O14908 333 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 RNASEH2AO75792 299 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 KIAA0754O94854 1291 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 OXCT1P55809 520 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 RBL2Q08999 1139 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 RAPGEF1Q13905 1077 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 KRT72Q14CN4 511 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 PARP10Q53GL7 1025 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 ARSHQ5FYA8 562 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 CCSAPQ6IQ19 270 aaPredicted RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 EFCAB13Q8IY85 973 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 PHACTR4Q8IZ21 702 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 FAM13CQ8NE31 585 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 ERP27Q96DN0 273 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 BICD1Q96G01 975 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 MRFAP1L1Q96HT8 127 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 FAM81BQ96LP2 452 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 TTC14Q96N46 770 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 EMILIN2Q9BXX0 1053 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 XPO4Q9C0E2 1151 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 POLG2Q9UHN1 485 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 ANGEL1Q9UNK9 670 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 MYO1BO43795 1136 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 E2F6O75461 281 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms