RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 PIK3CDO00329 1044 aa22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 CPLX1O14810 134 aa22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 MYCNP04198 464 aaPredicted RBP22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 HOXA13P31271 388 aaPredicted RBP22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 LRRC41Q15345 812 aa22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 DIS3LQ8TF46 1054 aaKnown RBP22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 SCFD2Q8WU76 684 aa22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 RNF26Q9BY78 433 aaPredicted RBP22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 PSTPIP2Q9H939 334 aa22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 Q9Y3F1 56 aa22.16■■□□□ 1.14
CTDSP1-213ENST00000496785 hCG_1642624A0A1W2PR95 340 aa22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 NKRFO15226 690 aaKnown RBP eCLIP22.15■■□□□ 1.141e-10■■□□□ 11.6
CTDSP1-213ENST00000496785 NR3C2P08235 984 aa22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 IFNAR1P17181 557 aa22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 EIF2AK2P19525 551 aaKnown RBP22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 ADCYAP1R1P41586 468 aa22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 MNX1P50219 401 aaPredicted RBP22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 NAPAP54920 295 aa22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 GJC2Q5T442 439 aaPredicted RBP22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 TAPT1Q6NXT6 567 aa22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 FCHSD1Q86WN1 690 aa22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 TRIM22Q8IYM9 498 aa22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 CCDC12Q8WUD4 166 aaPredicted RBP22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 AP5M1Q9H0R1 490 aa22.15■■□□□ 1.14
CTDSP1-213ENST00000496785 SYNRGQ9UMZ2 1314 aa22.14■■□□□ 1.14
CTDSP1-213ENST00000496785 RBM47A0AV96 593 aaKnown RBP22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 PRPF3O43395 683 aaKnown RBP22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 EIF3JO75822 258 aaKnown RBP22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 PGK1P00558 417 aa22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 COL6A1P12109 1028 aa22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 GJA9P57773 515 aa22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 CCT2P78371 535 aaKnown RBP22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 PCSK9Q8NBP7 692 aaKnown RBP22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 GPKOWQ92917 476 aaPredicted RBP eCLIP22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 PDCD2LQ9BRP1 358 aa22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 TSEN34Q9BSV6 310 aaKnown RBP22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 UPF3AQ9H1J1 476 aaKnown RBP22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 EHMT1Q9H9B1 1298 aa22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 BARHL2Q9NY43 387 aa22.14■■□□□ 1.13
CTDSP1-213ENST00000496785 ADAMTS4O75173 837 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 CDKL5O76039 1030 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 C6orf222P0C671 652 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 SCG2P13521 617 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 CST5P28325 142 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 CCND2P30279 289 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 NEK4P51957 841 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 TTLL4Q14679 1199 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 PFKFB3Q16875 520 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 DUSP28Q4G0W2 176 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 WWC2Q6AWC2 1192 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 TLK2Q86UE8 772 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 DPF3Q92784 378 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 C22orf23Q9BZE7 217 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 WDR11Q9BZH6 1224 aa22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 SLKQ9H2G2 1235 aaPredicted RBP22.13■■□□□ 1.13
CTDSP1-213ENST00000496785 MOXD2PA6NHM9 499 aa22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 STAM2O75886 525 aa22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 AK2P54819 239 aa22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 PGM5Q15124 567 aa22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 XRRA1Q6P2D8 792 aa22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 IL27Q8NEV9 243 aa22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 LENG1Q96BZ8 264 aaPredicted RBP22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 SENP6Q9GZR1 1112 aaPredicted RBP22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 NCOA5Q9HCD5 579 aaKnown RBP22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 PDGFCQ9NRA1 345 aa22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 GNEQ9Y223 722 aaKnown RBP22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 DDX49Q9Y6V7 483 aaKnown RBP22.12■■□□□ 1.13
CTDSP1-213ENST00000496785 FRMPD4Q14CM0 1322 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 SPDYE3A6NKU9 549 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 MEIS2O14770 477 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 ZEB2O60315 1214 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 SMPD1P17405 629 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 ADCY7P51828 1080 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 NKX3-2P78367 333 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 NTRK3Q16288 839 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 BRDTQ58F21 947 aaPredicted RBP22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 KCNV1Q6PIU1 500 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 USP17L6PQ6QN14 398 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 CCDC148Q8NFR7 591 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 SLC26A6Q9BXS9 759 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 PHF24Q9UPV7 400 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 NR2E3Q9Y5X4 410 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 BRCA2P51587 3418 aa22.11■■□□□ 1.13
CTDSP1-213ENST00000496785 STXBP3O00186 592 aa22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 MYCLP12524 364 aaPredicted RBP22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 RBM25P49756 843 aaKnown RBP22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 SSRP1Q08945 709 aaKnown RBP22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 STK3Q13188 491 aa22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 GNASQ5JWF2 1037 aa22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 MCTP2Q6DN12 878 aa22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 VSIG10LQ86VR7 867 aa22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 KLHDC9Q8NEP7 349 aa22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 PHKBQ93100 1093 aa22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 RIC8AQ9NPQ8 531 aa22.1■■□□□ 1.13
CTDSP1-213ENST00000496785 ESYT2A0FGR8 921 aa22.09■■□□□ 1.13
CTDSP1-213ENST00000496785 DYNC1LI2O43237 492 aaPredicted RBP22.09■■□□□ 1.13
CTDSP1-213ENST00000496785 ADCY6O43306 1168 aa22.09■■□□□ 1.13
CTDSP1-213ENST00000496785 EVI5O60447 810 aa22.09■■□□□ 1.13
CTDSP1-213ENST00000496785 FOSP01100 380 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms