RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 LDHDQ86WU2 507 aa17.15■□□□□ 0.34
COL15A1-204ENST00000496686 HAS1Q92839 578 aa17.15■□□□□ 0.34
COL15A1-204ENST00000496686 L3MBTL3Q96JM7 780 aaPredicted RBP17.15■□□□□ 0.34
COL15A1-204ENST00000496686 MTRQ99707 1265 aa17.15■□□□□ 0.34
COL15A1-204ENST00000496686 MMTAG2Q9BU76 263 aaKnown RBP17.15■□□□□ 0.34
COL15A1-204ENST00000496686 FBXO28Q9NVF7 368 aa17.15■□□□□ 0.34
COL15A1-204ENST00000496686 PPP1R9AQ9ULJ8 1098 aa17.15■□□□□ 0.34
COL15A1-204ENST00000496686 MARCH6O60337 910 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 VCAM1P19320 739 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 CDC25AP30304 524 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 AMPD3Q01432 767 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 MTMR2Q13614 643 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 HYIQ5T013 277 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 ISM2Q6H9L7 571 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 MCF2L2Q86YR7 1114 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 FAM20AQ96MK3 541 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
COL15A1-204ENST00000496686 LRRC27Q9C0I9 530 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 TTC12Q9H892 705 aaPredicted RBP17.14■□□□□ 0.33
COL15A1-204ENST00000496686 EMILIN3Q9NT22 766 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 MAP3K20Q9NYL2 800 aaKnown RBP17.14■□□□□ 0.33
COL15A1-204ENST00000496686 KDM3AQ9Y4C1 1321 aa17.14■□□□□ 0.33
COL15A1-204ENST00000496686 RPN1P04843 607 aaKnown RBP17.13■□□□□ 0.33
COL15A1-204ENST00000496686 SPP2Q13103 211 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 CUL4BQ13620 913 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 TMEM119Q4V9L6 283 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL15A1-204ENST00000496686 CCDC47Q96A33 483 aaKnown RBP17.13■□□□□ 0.33
COL15A1-204ENST00000496686 DCPSQ96C86 337 aaKnown RBP17.13■□□□□ 0.33
COL15A1-204ENST00000496686 CDK5RAP3Q96JB5 506 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 C7orf25Q9BPX7 421 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 SLC38A10Q9HBR0 1119 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 PCDHA12Q9UN75 941 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 ZKSCAN5Q9Y2L8 839 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 ZNF536O15090 1300 aa17.13■□□□□ 0.33
COL15A1-204ENST00000496686 ZBED4O75132 1171 aa17.12■□□□□ 0.33
COL15A1-204ENST00000496686 HSD17B4P51659 736 aa17.12■□□□□ 0.33
COL15A1-204ENST00000496686 GRB10Q13322 594 aa17.12■□□□□ 0.33
COL15A1-204ENST00000496686 ZNF658Q5TYW1 1059 aaPredicted RBP17.12■□□□□ 0.33
COL15A1-204ENST00000496686 DPY19L2Q6NUT2 758 aa17.12■□□□□ 0.33
COL15A1-204ENST00000496686 USP50Q70EL3 339 aaPredicted RBP17.12■□□□□ 0.33
COL15A1-204ENST00000496686 ETNPPLQ8TBG4 499 aa17.12■□□□□ 0.33
COL15A1-204ENST00000496686 SNX29Q8TEQ0 813 aa17.12■□□□□ 0.33
COL15A1-204ENST00000496686 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
COL15A1-204ENST00000496686 TANGO6Q9C0B7 1094 aa17.12■□□□□ 0.33
COL15A1-204ENST00000496686 MAF1Q9H063 256 aa17.12■□□□□ 0.33
COL15A1-204ENST00000496686 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
COL15A1-204ENST00000496686 RPAP3Q9H6T3 665 aaPredicted RBP17.12■□□□□ 0.33
COL15A1-204ENST00000496686 MYH7BA7E2Y1 1941 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 CBFA2T2O43439 604 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 CFBP00751 764 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 HOXA13P31271 388 aaPredicted RBP17.11■□□□□ 0.33
COL15A1-204ENST00000496686 PPP1R2P41236 205 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 DHX8Q14562 1220 aaKnown RBP17.11■□□□□ 0.33
COL15A1-204ENST00000496686 CNNM4Q6P4Q7 775 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 SULF1Q8IWU6 871 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 KCTD17Q8N5Z5 321 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 ZKSCAN4Q969J2 545 aaPredicted RBP17.11■□□□□ 0.33
COL15A1-204ENST00000496686 LENG9Q96B70 501 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 PNMA5Q96PV4 448 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 HSD3B7Q9H2F3 369 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 BLZF1Q9H2G9 400 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 MYPNQ86TC9 1320 aa17.11■□□□□ 0.33
COL15A1-204ENST00000496686 PPP1R3GB7ZBB8 358 aa17.1■□□□□ 0.33
COL15A1-204ENST00000496686 USP2O75604 605 aaPredicted RBP17.1■□□□□ 0.33
COL15A1-204ENST00000496686 FLOT1O75955 427 aa17.1■□□□□ 0.33
COL15A1-204ENST00000496686 RHOBTB3O94955 611 aa17.1■□□□□ 0.33
COL15A1-204ENST00000496686 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
COL15A1-204ENST00000496686 MSNP26038 577 aaKnown RBP17.1■□□□□ 0.33
COL15A1-204ENST00000496686 OAZ1P54368 228 aa17.1■□□□□ 0.33
COL15A1-204ENST00000496686 MAP3K9P80192 1104 aa17.1■□□□□ 0.33
COL15A1-204ENST00000496686 SH3D19Q5HYK7 790 aa17.1■□□□□ 0.33
COL15A1-204ENST00000496686 HAUS3Q68CZ6 603 aa17.1■□□□□ 0.33
COL15A1-204ENST00000496686 SV2BQ7L1I2 683 aa17.1■□□□□ 0.33
COL15A1-204ENST00000496686 RBM46Q8TBY0 533 aaKnown RBP17.1■□□□□ 0.33
COL15A1-204ENST00000496686 CTDP1Q9Y5B0 961 aaPredicted RBP17.1■□□□□ 0.33
COL15A1-204ENST00000496686 ZHX2Q9Y6X8 837 aa17.1■□□□□ 0.33
COL15A1-204ENST00000496686 POTEMA6NI47 508 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 KLRC4O43908 158 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 ZNF18P17022 549 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 CASP1P29466 404 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 ZNF76P36508 570 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 FANCCQ00597 558 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 SETQ01105 290 aaPredicted RBP17.09■□□□□ 0.33
COL15A1-204ENST00000496686 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.33
COL15A1-204ENST00000496686 PRR16Q569H4 304 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 PRAMEF18Q5VWM3 479 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 SPATA1Q5VX52 437 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 FCHSD1Q86WN1 690 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 DRC7Q8IY82 874 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 LRRC15Q8TF66 581 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 CLEC4DQ8WXI8 215 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 RAD54LQ92698 747 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 STAMQ92783 540 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 AGBL1Q96MI9 1066 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 TRIM9Q9C026 710 aa17.09■□□□□ 0.33
COL15A1-204ENST00000496686 BLOC1S4Q9NUP1 217 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms