RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 OGDHLQ9ULD0 1010 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 PCDHA1Q9Y5I3 950 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 NFIBO00712 420 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 PRPF3O43395 683 aaKnown RBP9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 CTDNEP1O95476 244 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 ALDH5A1P51649 535 aaPredicted RBP9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 NLRP5P59047 1200 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 RPS6P62753 249 aaKnown RBP9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 PDE4DQ08499 809 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 CUL4AQ13619 759 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 ACVR2BQ13705 512 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 GNL2Q13823 731 aaKnown RBP9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 BAATQ14032 418 aaPredicted RBP9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 TMTC3Q6ZXV5 915 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 FAM133AQ8N9E0 248 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 WASF1Q92558 559 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 SHISA4Q96DD7 197 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 ALG1Q9BT22 464 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 C11orf49Q9H6J7 331 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 XPNPEP3Q9NQH7 507 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 KIF3AQ9Y496 699 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 NR2E3Q9Y5X4 410 aa9.39□□□□□ -0.91
SMARCD3-215ENST00000496530 FRMPD3Q5JV73 1810 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 DNM1LO00429 736 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 ZEB2O60315 1214 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 CFBP00751 764 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 IFNAR1P17181 557 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 XBP1P17861 261 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 HMGN5P82970 282 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 CNTN2Q02246 1040 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 PRAMEF19Q5SWL8 479 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 ARHGEF16Q5VV41 709 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 HEATR3Q7Z4Q2 680 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 NSUN7Q8NE18 718 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 NSUN6Q8TEA1 469 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 MTMR8Q96EF0 704 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 INTS4Q96HW7 963 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 PAWRQ96IZ0 340 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 RBM27Q9P2N5 1060 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-215ENST00000496530 VPS37CA5D8V6 355 aaPredicted RBP9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 SOWAHBA6NEL2 793 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 GCOM1H8Y6P7 765 aaPredicted RBP9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 hCG_1984214I3L0E3 225 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 EVI5O60447 810 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 DUSP11O75319 330 aaKnown RBP9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 DEXIO95424 95 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 SNAI1O95863 264 aaPredicted RBP9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 IGHA2P01877 340 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 POLR2MP0CAP2 368 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 ZNF865P0CJ78 1059 aaPredicted RBP9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 TNFAIP2Q03169 654 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 NTRK3Q16288 839 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 BRDTQ58F21 947 aaPredicted RBP9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 LHX8Q68G74 356 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 IQSEC1Q6DN90 963 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 SLC30A10Q6XR72 485 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 ZNF713Q8N859 430 aaPredicted RBP9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 PCSK9Q8NBP7 692 aaKnown RBP9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 TRPV1Q8NER1 839 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 SMARCC2Q8TAQ2 1214 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 CLEC4DQ8WXI8 215 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 C8orf76Q96K31 380 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 AIFM3Q96NN9 605 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 IWS1Q96ST2 819 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 SENP6Q9GZR1 1112 aaPredicted RBP9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 AP5M1Q9H0R1 490 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 EHMT1Q9H9B1 1298 aa9.37□□□□□ -0.91
SMARCD3-215ENST00000496530 SMCO2A6NFE2 343 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 MOXD2PA6NHM9 499 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 NKRFO15226 690 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 CYTH3O43739 400 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 C6orf222P0C671 652 aaPredicted RBP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 FDPSP14324 419 aaKnown RBP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 PDCP20941 246 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 NAPAP54920 295 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 ST3GAL1Q11201 340 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 TTLL4Q14679 1199 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 SAFBQ15424 915 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 STXBP2Q15833 593 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 CCDC144BQ3MJ40 725 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 FOXD4L6Q3SYB3 417 aaPredicted RBP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 GJC2Q5T442 439 aaPredicted RBP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 ANO1Q5XXA6 986 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 FOXD4L3Q6VB84 417 aaPredicted RBP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 EEPD1Q7L9B9 569 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 GPKOWQ92917 476 aaPredicted RBP eCLIP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 RMDN3Q96TC7 470 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 TSEN34Q9BSV6 310 aaKnown RBP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 RNF26Q9BY78 433 aaPredicted RBP9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 GLT8D2Q9H1C3 349 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 GJB4Q9NTQ9 266 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 VPS54Q9P1Q0 977 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 PRKAG2Q9UGJ0 569 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 KCNJ14Q9UNX9 436 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 Q9Y3F1 56 aa9.36□□□□□ -0.91
SMARCD3-215ENST00000496530 SCG2P13521 617 aa9.35□□□□□ -0.91
SMARCD3-215ENST00000496530 TAL1P17542 331 aaPredicted RBP9.35□□□□□ -0.91
SMARCD3-215ENST00000496530 LRRC41Q15345 812 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms