RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 TRAF1Q13077 416 aa25.56■■□□□ 1.68
PCOLCE-210ENST00000496269 TRIM60Q495X7 471 aa25.56■■□□□ 1.68
PCOLCE-210ENST00000496269 CHRDL2Q6WN34 429 aa25.56■■□□□ 1.68
PCOLCE-210ENST00000496269 PIBF1Q8WXW3 757 aa25.56■■□□□ 1.68
PCOLCE-210ENST00000496269 RRP36Q96EU6 259 aaKnown RBP25.56■■□□□ 1.68
PCOLCE-210ENST00000496269 PXMP2Q9NR77 195 aa25.56■■□□□ 1.68
PCOLCE-210ENST00000496269 TRIOBPQ9H2D6 2365 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 ARIH2O95376 493 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 ASGR1P07306 291 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 SYN1P17600 705 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 RPS6KB1P23443 525 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 HOXA13P31271 388 aaPredicted RBP25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 RCAN1P53805 252 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 BEX3Q00994 111 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 IWS1Q96ST2 819 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 GDF15Q99988 308 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 WDR11Q9BZH6 1224 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 FRMPD4Q14CM0 1322 aa25.55■■□□□ 1.68
PCOLCE-210ENST00000496269 EIF2AK2P19525 551 aaKnown RBP25.54■■□□□ 1.68
PCOLCE-210ENST00000496269 GNASQ5JWF2 1037 aa25.54■■□□□ 1.68
PCOLCE-210ENST00000496269 CCDC62Q6P9F0 684 aa25.54■■□□□ 1.68
PCOLCE-210ENST00000496269 BLOC1S2Q6QNY1 142 aa25.54■■□□□ 1.68
PCOLCE-210ENST00000496269 PCSK9Q8NBP7 692 aaKnown RBP25.54■■□□□ 1.68
PCOLCE-210ENST00000496269 PDCD2LQ9BRP1 358 aa25.54■■□□□ 1.68
PCOLCE-210ENST00000496269 SPC25Q9HBM1 224 aa25.54■■□□□ 1.68
PCOLCE-210ENST00000496269 KLF18A0A0U1RQI7 1052 aa25.53■■□□□ 1.68
PCOLCE-210ENST00000496269 DYNC1LI2O43237 492 aaPredicted RBP25.53■■□□□ 1.68
PCOLCE-210ENST00000496269 ZBTB43O43298 467 aa25.53■■□□□ 1.68
PCOLCE-210ENST00000496269 HABP4Q5JVS0 413 aaKnown RBP25.53■■□□□ 1.68
PCOLCE-210ENST00000496269 Q6ZUG5 572 aa25.53■■□□□ 1.68
PCOLCE-210ENST00000496269 IL31RAQ8NI17 732 aa25.53■■□□□ 1.68
PCOLCE-210ENST00000496269 MPHOSPH6Q99547 160 aaKnown RBP25.53■■□□□ 1.68
PCOLCE-210ENST00000496269 RBM27Q9P2N5 1060 aaKnown RBP25.53■■□□□ 1.68
PCOLCE-210ENST00000496269 ATP11BQ9Y2G3 1177 aa25.53■■□□□ 1.68
PCOLCE-210ENST00000496269 hCG_1642624A0A1W2PR95 340 aa25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 B4DLN1 442 aa25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 GCOM1H8Y6P7 765 aaPredicted RBP25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 NR3C2P08235 984 aa25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 POLR2MP0CAP2 368 aa25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 CDC27P30260 824 aa25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 MRPL12P52815 198 aaKnown RBP25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 FSCN1Q16658 493 aaKnown RBP25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 ARHGEF16Q5VV41 709 aa25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 SCFD2Q8WU76 684 aa25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 RBM28Q9NW13 759 aaKnown RBP25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 ELP1O95163 1332 aa25.52■■□□□ 1.68
PCOLCE-210ENST00000496269 SCN10AQ9Y5Y9 1956 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 RGS20O76081 388 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 CASTP20810 708 aaKnown RBP25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 CDK7P50613 346 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 APOBRQ0VD83 1088 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 RTN1Q16799 776 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 SYNE3Q6ZMZ3 975 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 NOL8Q76FK4 1167 aaKnown RBP25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 COPS5Q92905 334 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 BRF1Q92994 677 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 ZSWIM6Q9HCJ5 1215 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 STARD7Q9NQZ5 370 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 PDLIM7Q9NR12 457 aa25.51■■□□□ 1.67
PCOLCE-210ENST00000496269 MEIS2O14770 477 aa25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 NKRFO15226 690 aaKnown RBP eCLIP25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 MAGEA10P43363 369 aaPredicted RBP25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 EVCP57679 992 aa25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 TLE2Q04725 743 aa25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 PGM5Q15124 567 aa25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 PPP2R5BQ15173 497 aa25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 STXBP2Q15833 593 aa25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 ANKRD33Q7Z3H0 272 aa25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 CCDC82Q8N4S0 544 aa25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 AP5M1Q9H0R1 490 aa25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 SEC63Q9UGP8 760 aaKnown RBP25.5■■□□□ 1.67
PCOLCE-210ENST00000496269 GRIN2DO15399 1336 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 GOLGA8AA7E2F4 631 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 GOLGA8BA8MQT2 603 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 PIK3CDO00329 1044 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 PSMA5P28066 241 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 BMP8BP34820 402 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 CXCL17Q6UXB2 119 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 SH3RF1Q7Z6J0 888 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 VSIG10LQ86VR7 867 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 SLC43A3Q8NBI5 491 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 GLT1D1Q96MS3 346 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 TM6SF1Q9BZW5 370 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 MYH7BA7E2Y1 1941 aa25.49■■□□□ 1.67
PCOLCE-210ENST00000496269 EIF3JO75822 258 aaKnown RBP25.48■■□□□ 1.67
PCOLCE-210ENST00000496269 TOB2Q14106 344 aaPredicted RBP25.48■■□□□ 1.67
PCOLCE-210ENST00000496269 TYW1BQ6NUM6 668 aa25.48■■□□□ 1.67
PCOLCE-210ENST00000496269 RUFY3Q7L099 469 aa25.48■■□□□ 1.67
PCOLCE-210ENST00000496269 TRIM43BA6NCK2 446 aa25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 TXNP10599 105 aaKnown RBP25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 TTLL4Q14679 1199 aa25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 WWC2Q6AWC2 1192 aa25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 USP17L6PQ6QN14 398 aa25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 FCHSD1Q86WN1 690 aa25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 OR6J1Q8NGC5 347 aa25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 GPKOWQ92917 476 aaPredicted RBP eCLIP25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 TRIM43Q96BQ3 446 aaPredicted RBP25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 TOX2Q96NM4 488 aa25.47■■□□□ 1.67
PCOLCE-210ENST00000496269 A0A0U1RQG5 324 aaPredicted RBP25.46■■□□□ 1.67
PCOLCE-210ENST00000496269 A6NJR5 290 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms