RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 BLOC1S4Q9NUP1 217 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 NYAP2Q9P242 653 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 TTC26A0AVF1 554 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 B4DLN1 442 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 H0YIN7 160 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
CMSS1-208ENST00000496116 FGFR1OPO95684 399 aaKnown RBP12.37□□□□□ -0.43
CMSS1-208ENST00000496116 TRIM21P19474 475 aaKnown RBP12.37□□□□□ -0.43
CMSS1-208ENST00000496116 MTIF2P46199 727 aaKnown RBP12.37□□□□□ -0.43
CMSS1-208ENST00000496116 MCM6Q14566 821 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 C2CD5Q86YS7 1000 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 ZSCAN29Q8IWY8 852 aaPredicted RBP12.37□□□□□ -0.43
CMSS1-208ENST00000496116 KIAA0895Q8NCT3 520 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 RAD54LQ92698 747 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 IQCDQ96DY2 449 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 PNMA5Q96PV4 448 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 DNAJC7Q99615 494 aa12.37□□□□□ -0.43
CMSS1-208ENST00000496116 KDM3AQ9Y4C1 1321 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 RNF225M0QZC1 329 aaPredicted RBP12.36□□□□□ -0.43
CMSS1-208ENST00000496116 RAD21O60216 631 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 TBC1D8BQ0IIM8 1120 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 TCP10Q12799 353 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 PSMD2Q13200 908 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 ZNF569Q5MCW4 686 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 FKBP15Q5T1M5 1219 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 STYK1Q6J9G0 422 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 ACRBPQ8NEB7 543 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 NOC4LQ9BVI4 516 aaKnown RBP12.36□□□□□ -0.43
CMSS1-208ENST00000496116 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
CMSS1-208ENST00000496116 NT5C3AQ9H0P0 336 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 DNAJC18Q9H819 358 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 SERPINA10Q9UK55 444 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 PCDHA12Q9UN75 941 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 MYH7BA7E2Y1 1941 aa12.36□□□□□ -0.43
CMSS1-208ENST00000496116 CTAGE9A4FU28 777 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 MYMKA6NI61 221 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 EDIL3O43854 480 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 ECE2O60344 883 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 NDUFA10O95299 355 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 EEF2P13639 858 aaKnown RBP12.35□□□□□ -0.43
CMSS1-208ENST00000496116 SEPT2Q15019 361 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 TMEM119Q4V9L6 283 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 DACT2Q5SW24 774 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 CENPPQ6IPU0 288 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 GUF1Q8N442 669 aaKnown RBP12.35□□□□□ -0.43
CMSS1-208ENST00000496116 GPR161Q8N6U8 529 aaKnown RBP12.35□□□□□ -0.43
CMSS1-208ENST00000496116 ZNHIT6Q9NWK9 470 aaKnown RBP12.35□□□□□ -0.43
CMSS1-208ENST00000496116 EPN1Q9Y6I3 576 aaPredicted RBP12.35□□□□□ -0.43
CMSS1-208ENST00000496116 USP11P51784 963 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 CLCN6P51797 869 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 CACNB3P54284 484 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 LRRC63Q05C16 580 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 BMS1Q14692 1282 aaKnown RBP12.35□□□□□ -0.43
CMSS1-208ENST00000496116 QRICH1Q2TAL8 776 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 MCTP2Q6DN12 878 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 TATDN1Q6P1N9 297 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 TMEM179Q6ZVK1 233 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 DYMQ7RTS9 669 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 KRT222Q8N1A0 295 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 CEP112Q8N8E3 955 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 PCMTD1Q96MG8 357 aaPredicted RBP12.35□□□□□ -0.43
CMSS1-208ENST00000496116 KCNQ5Q9NR82 932 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
CMSS1-208ENST00000496116 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
CMSS1-208ENST00000496116 PCDHA1Q9Y5I3 950 aa12.35□□□□□ -0.43
CMSS1-208ENST00000496116 SIPA1L1O43166 1804 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 ABCB11O95342 1321 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 DDTLA6NHG4 134 aaPredicted RBP12.34□□□□□ -0.43
CMSS1-208ENST00000496116 SLC26A4O43511 780 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 IDEP14735 1019 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 TUBB4BP68371 445 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 KRT83P78385 493 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 ICA1Q05084 483 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 AP3B2Q13367 1082 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 CDC37Q16543 378 aaPredicted RBP12.34□□□□□ -0.43
CMSS1-208ENST00000496116 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 TMCO3Q6UWJ1 677 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 DDX12PQ92771 950 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 HAS1Q92839 578 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 ERGIC2Q96RQ1 377 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 CHP1Q99653 195 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 SLF1Q9BQI6 1058 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 FAM198AQ9UFP1 575 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 CDC23Q9UJX2 597 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 IPO7O95373 1038 aaKnown RBP12.34□□□□□ -0.43
CMSS1-208ENST00000496116 CYLC1P35663 651 aaPredicted RBP12.34□□□□□ -0.43
CMSS1-208ENST00000496116 ZBED6P86452 979 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 FIGNQ5HY92 759 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 TEX35Q5T0J7 233 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 MSL1Q68DK7 614 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 RSRC2Q7L4I2 434 aaKnown RBP12.34□□□□□ -0.43
CMSS1-208ENST00000496116 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 CNKSR1Q969H4 720 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 NAPGQ99747 312 aaPredicted RBP12.34□□□□□ -0.43
CMSS1-208ENST00000496116 TSG101Q99816 390 aa12.34□□□□□ -0.43
CMSS1-208ENST00000496116 TTYH3Q9C0H2 523 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms