RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FAM151AQ8WW52 585 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 ERCC4Q92889 916 aaPredicted RBP7.8□□□□□ -1.16
USP39-219ENST00000496047 MKL1Q969V6 931 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 CSRNP1Q96S65 589 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 CCSER1Q9C0I3 900 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 UBA5Q9GZZ9 404 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 TDRD3Q9H7E2 651 aaKnown RBP7.8□□□□□ -1.16
USP39-219ENST00000496047 TTC12Q9H892 705 aaPredicted RBP7.8□□□□□ -1.16
USP39-219ENST00000496047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.8□□□□□ -1.16
USP39-219ENST00000496047 RIC8AQ9NPQ8 531 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 DISC1Q9NRI5 854 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 IFNKQ9P0W0 207 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 SBF1O95248 1867 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 COL11A1P12107 1806 aaPredicted RBP7.8□□□□□ -1.16
USP39-219ENST00000496047 KIAA1217Q5T5P2 1943 aa7.8□□□□□ -1.16
USP39-219ENST00000496047 POLR2AP24928 1970 aaKnown RBP7.79□□□□□ -1.16
USP39-219ENST00000496047 MYH9P35579 1960 aaKnown RBP7.79□□□□□ -1.16
USP39-219ENST00000496047 M0R2N6 131 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 VIL1P09327 827 aaKnown RBP7.79□□□□□ -1.16
USP39-219ENST00000496047 EEF2P13639 858 aaKnown RBP7.79□□□□□ -1.16
USP39-219ENST00000496047 LMOD1P29536 600 aaPredicted RBP7.79□□□□□ -1.16
USP39-219ENST00000496047 NFIAQ12857 509 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 NOLC1Q14978 699 aaKnown RBP eCLIP7.79□□□□□ -1.16
USP39-219ENST00000496047 DALRD3Q5D0E6 543 aaKnown RBP7.79□□□□□ -1.16
USP39-219ENST00000496047 EARS2Q5JPH6 523 aaKnown RBP7.79□□□□□ -1.16
USP39-219ENST00000496047 CIAPIN1Q6FI81 312 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 ISM2Q6H9L7 571 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 TATDN1Q6P1N9 297 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 FILIP1Q7Z7B0 1213 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 CABP7Q86V35 215 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 PARP9Q8IXQ6 854 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 ADGRF4Q8IZF3 695 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 RASGRP4Q8TDF6 673 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 TBCKQ8TEA7 893 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 HOOK2Q96ED9 719 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 PAGE5Q96GU1 130 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 GMCL1Q96IK5 515 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 EPSTI1Q96J88 318 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 AMNQ9BXJ7 453 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 SLC4A5Q9BY07 1137 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 MTFR1LQ9H019 292 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 TAOK3Q9H2K8 898 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 GINM1Q9NU53 330 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 STK17AQ9UEE5 414 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 ZNRF3Q9ULT6 936 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 PHIPQ8WWQ0 1821 aa7.79□□□□□ -1.16
USP39-219ENST00000496047 SMCHD1A6NHR9 2005 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 BICDL2A1A5D9 508 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 DDTLA6NHG4 134 aaPredicted RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 SPDYE3A6NKU9 549 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 BHMG1C9JSJ3 638 aaPredicted RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 PSMD14O00487 310 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 PSMA7O14818 248 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 AP5Z1O43299 807 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 FOSP01100 380 aaPredicted RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 TUBB4AP04350 444 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 BMP3P12645 472 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 DPEP1P16444 411 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 RPS12P25398 132 aaKnown RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 SARSP49591 514 aaKnown RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 MDM2Q00987 491 aaPredicted RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 GRIN1Q05586 938 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 DPYDQ12882 1025 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 PAK1Q13153 545 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 CDC37Q16543 378 aaPredicted RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 ZNF658Q5TYW1 1059 aaPredicted RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 SYDE2Q5VT97 1194 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 SPATA1Q5VX52 437 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 JAKMIP3Q5VZ66 844 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 KRT79Q5XKE5 535 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 HAUS3Q68CZ6 603 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 SH3RF1Q7Z6J0 888 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 METTL3Q86U44 580 aaKnown RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 FAM83AQ86UY5 434 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 FBXO11Q86XK2 927 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 FAM114A1Q8IWE2 563 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 SLFN12Q8IYM2 578 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 MTMR14Q8NCE2 650 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 NOC3LQ8WTT2 800 aaKnown RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 SHISA4Q96DD7 197 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 PRIMPOLQ96LW4 560 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 XPO4Q9C0E2 1151 aaKnown RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 NT5C3AQ9H0P0 336 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 PSTPIP2Q9H939 334 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 JMJD4Q9H9V9 463 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 VEZTQ9HBM0 779 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 EXOC1Q9NV70 894 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 MAGEC2Q9UBF1 373 aaPredicted RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 BIN2Q9UBW5 565 aaPredicted RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 ZNF70Q9UC06 446 aaPredicted RBP7.78□□□□□ -1.16
USP39-219ENST00000496047 FAM198AQ9UFP1 575 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 PNMA2Q9UL42 364 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 NFE2L3Q9Y4A8 694 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 ADGRG1Q9Y653 693 aa7.78□□□□□ -1.16
USP39-219ENST00000496047 TCP10L2B9ZVM9 353 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 RAD17O75943 681 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 KIF20AO95235 890 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 GDF11O95390 407 aa7.77□□□□□ -1.17
USP39-219ENST00000496047 FGFR1OPO95684 399 aaKnown RBP7.77□□□□□ -1.17
USP39-219ENST00000496047 RPN1P04843 607 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms