RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 FLT1P17948 1338 aa9.81□□□□□ -0.84
EPHA4-213ENST00000495693 DDX60LQ5H9U9 1706 aaKnown RBP9.8□□□□□ -0.84
EPHA4-213ENST00000495693 H0YIN7 160 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 PRDM1O75626 825 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 TOP1P11387 765 aaKnown RBP9.8□□□□□ -0.84
EPHA4-213ENST00000495693 GNA11P29992 359 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 SMTNP53814 917 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 TLR1Q15399 786 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 LUZP1Q86V48 1076 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 LARGE2Q8N3Y3 721 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 DAGLBQ8NCG7 672 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 TEKT1Q969V4 418 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 AIFM3Q96NN9 605 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 SPZ1Q9BXG8 430 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 FTOQ9C0B1 505 aaKnown RBP eCLIP9.8□□□□□ -0.84
EPHA4-213ENST00000495693 INCENPQ9NQS7 918 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 IMPACTQ9P2X3 320 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 SEC63Q9UGP8 760 aaKnown RBP9.8□□□□□ -0.84
EPHA4-213ENST00000495693 TUBE1Q9UJT0 475 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 TACC3Q9Y6A5 838 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 MYH6P13533 1939 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 MYH2Q9UKX2 1941 aa9.8□□□□□ -0.84
EPHA4-213ENST00000495693 BACH1O14867 736 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 DTNBO60941 627 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 OFD1O75665 1012 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 PARP1P09874 1014 aaKnown RBP9.79□□□□□ -0.84
EPHA4-213ENST00000495693 RHOQP17081 205 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 MARCKSP29966 332 aaPredicted RBP9.79□□□□□ -0.84
EPHA4-213ENST00000495693 HOXA7P31268 230 aaPredicted RBP9.79□□□□□ -0.84
EPHA4-213ENST00000495693 ZNF75DP51815 510 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 CLDN10P78369 228 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 IQCB1Q15051 598 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 PKN1Q16512 942 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 ASPRV1Q53RT3 343 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 GNASQ5JWF2 1037 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 SOGA3Q5TF21 947 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 KRBA2Q6ZNG9 492 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 SMIM5Q71RC9 77 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 PLA2G4DQ86XP0 818 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 TEX2Q8IWB9 1127 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 SIX5Q8N196 739 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 STK11IPQ8N1F8 1099 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 MLKLQ8NB16 471 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 RHBDD1Q8TEB9 315 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 PIBF1Q8WXW3 757 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 GMCL1Q96IK5 515 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 CCDC17Q96LX7 622 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 GLT8D2Q9H1C3 349 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 EHD4Q9H223 541 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 DHX36Q9H2U1 1008 aaKnown RBP9.79□□□□□ -0.84
EPHA4-213ENST00000495693 CABP5Q9NP86 173 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 POLLQ9UGP5 575 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 FOCADQ5VW36 1801 aa9.79□□□□□ -0.84
EPHA4-213ENST00000495693 CYP2D7A0A087X1C5 515 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 CCDC194A0A1B0GVG4 234 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 MYL1P05976 194 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 TPM2P07951 284 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 MMP10P09238 476 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 GUCY1A2P33402 732 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 NOVP48745 357 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 CDK8P49336 464 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 FAM47AQ5JRC9 791 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 TTC38Q5R3I4 469 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 TMEM214Q6NUQ4 689 aaKnown RBP9.78□□□□□ -0.84
EPHA4-213ENST00000495693 SHC4Q6S5L8 630 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 COL23A1Q86Y22 540 aaPredicted RBP9.78□□□□□ -0.84
EPHA4-213ENST00000495693 MAPKAPK5Q8IW41 473 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 BLIDQ8IZY5 108 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 OGFOD1Q8N543 542 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 SMARCE1Q969G3 411 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 RRP36Q96EU6 259 aaKnown RBP9.78□□□□□ -0.84
EPHA4-213ENST00000495693 NAP1L4Q99733 375 aaKnown RBP9.78□□□□□ -0.84
EPHA4-213ENST00000495693 VPS33BQ9H267 617 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 MAGEF1Q9HAY2 307 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 C6orf50Q9HD87 102 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 DNAAF2Q9NVR5 837 aaKnown RBP9.78□□□□□ -0.84
EPHA4-213ENST00000495693 STK32BQ9NY57 414 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 VPS54Q9P1Q0 977 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 CLIP2Q9UDT6 1046 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 FBXO2Q9UK22 296 aaPredicted RBP9.78□□□□□ -0.84
EPHA4-213ENST00000495693 PCDHA4Q9UN74 947 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 STX8Q9UNK0 236 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 KCNJ14Q9UNX9 436 aa9.78□□□□□ -0.84
EPHA4-213ENST00000495693 ANKRD31Q8N7Z5 1873 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 TNS1Q9HBL0 1735 aaKnown RBP9.77□□□□□ -0.85
EPHA4-213ENST00000495693 ESYT2A0FGR8 921 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 WTIPA6NIX2 430 aaPredicted RBP9.77□□□□□ -0.85
EPHA4-213ENST00000495693 M0R2N6 131 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 CDK2AP1O14519 115 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 CCP110O43303 1012 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 WDHD1O75717 1129 aaPredicted RBP9.77□□□□□ -0.85
EPHA4-213ENST00000495693 PLEKHA8P1O95397 391 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 RASA1P20936 1047 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 LONP1P36776 959 aaKnown RBP9.77□□□□□ -0.85
EPHA4-213ENST00000495693 RHBDL3P58872 404 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 ATP2C1P98194 919 aaPredicted RBP9.77□□□□□ -0.85
EPHA4-213ENST00000495693 MYL5Q02045 173 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 POSTNQ15063 836 aa9.77□□□□□ -0.85
EPHA4-213ENST00000495693 GPATCH4Q5T3I0 446 aaKnown RBP9.77□□□□□ -0.85
EPHA4-213ENST00000495693 NT5DC1Q5TFE4 455 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms